Lolium rigidum (rigid ryegrass): 124701562
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Entry
124701562 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124701562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124701562
03036 Chromosome and associated proteins [BR:
lrd03036
]
124701562
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124701562
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124701562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
124701562
NCBI-ProteinID:
XP_047089606
LinkDB
All DBs
Position
3:48549142..48553572
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AA seq
1010 aa
AA seq
DB search
MAVDSMFPVLRASDYFTRPSIDELVEREAADPGYCSRVPGFVVGRVRYGQVKFSGDTDVR
GLDLNGIVTFDRHCVEVYGDEAGKPAVGHGLNKAAEVTLRLDLRGLPEAGALVELLRCRA
KKQGARFLSFNPVNGNWKFEVDHFSRFGFVDEEEDDVAMDEAVVRQPPVAEVRDPPPNGH
QLELSHSLPAHLGLDPAKMQEMRSALFPNDEDDEDMEDGFPSDHRYLSRERMNVDTPDTS
AKGPRLRSLSPLHDSSQKFGRRSGMLPRKEPHALLEYHVNSPDPGPSSHGILMSGKNKGF
PMRMTKVEGFKLPAEQETPVAGKTYSNCVVDAALFMGRSFRVGWGPNGILLHSGSLVNCP
GTGLSSVIHIEKVAADKVVRDEQNKVKDELTELCFSDPMDLHRRLDREILVTESGKFKLK
LQKVVASRFILPEICRSYIDIIERQLEISDLSMSSRVLLMHQVTVWELIRVLFSQRAAGN
QLEFSGDEDQEGMILDKKEGSADIDLEALPLARRADFSNWLQDSVCHRVQGEVGSLSDAR
YLEHIILLLTGRQLDTATEIAASRGDVRLAILLSQAGGSMLNRSDVAQQLDMWKINGLDF
NYIEEDRLKVYELLAGNVHGALLDSPLDWKRYLGLIMWYQLSPDTSLDILIHSYYQLLGE
GKVPNPVPVYIDEGPLEEALQWSPGDRFDISFYLMLLHANQDEKFGLLKTMFSAFSSSYD
PLDYHMIWHQRSILEAIGAFSTNDLHVLDLSFVHQLLCLGKCHWAIYVILHMQHVDDAPY
IHEKLIREVLSQYCEIWSKDEAQRQYIEELGIPAEWIHEALALYHEYYGDRQGALENYIQ
CGNWKKAHTIFMTSVAHSLFLSSKHQEIWDITNVLENHKSEIADWDVGAGIYIDYFIIKN
SMQEDSTMDDDDSDPLETKNESCQSFFIRLNDSLNIWGSKLPVEARACYSKMAEELCELL
MNSPGEGSAPSLYMGCFETMLNAPVPDDHRASYLQEAVSVFTDILCQDSF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggactccatgttcccggtcctgcgtgcctccgactacttcactcggccgtcg
atcgacgagctggtcgagagggaggcggctgatccaggctactgcagcagggttccaggc
ttcgtcgtcgggagggtgaggtatggacaggttaagttctccggcgacaccgatgtgagg
gggttggacctgaatggaatcgtcacgtttgaccgccattgcgtggaggtttacggggac
gaggctggtaaacctgcggtagggcatggccttaataaagctgcggaggtgacgttgagg
ctggatttgagggggcttccagaggccggcgccctggttgagcttctgaggtgccgcgcg
aagaagcagggtgctaggtttctctctttcaatcctgtgaatggtaactggaagtttgag
gtcgatcacttcagcaggtttgggtttgtggacgaggaggaagatgatgttgccatggat
gaggcggttgttcgacaaccaccggttgctgaagtaagagacccacctcccaatggacat
caactggagctttcacattcattgcctgctcatcttgggcttgaccctgcaaagatgcaa
gagatgcggtcagctttgtttcccaatgatgaagacgatgaagatatggaggatggcttt
ccatctgatcacagatacctgagcagagagaggatgaatgtggatacacccgacactagt
gctaaaggtccgaggctgaggtctctgtctcctttgcacgattcttctcagaaattcgga
aggagatctggtatgcttccgaggaaagaaccacatgcactgctggaatatcatgtaaat
tctccggaccctggtccatcttctcatggtattcttatgtctggaaagaacaagggattt
ccgatgagaatgaccaaggtagaaggctttaaactgccggccgagcaagaaactcctgtt
gcaggaaaaacatattctaactgcgtagtggatgctgctttattcatgggaagatcattt
cgagttggttggggaccaaatggcatccttctccattctggtagtctcgtcaactgtcct
ggaactggcctttcttctgttattcacatagagaaagttgcagctgataaagttgtgcgt
gatgagcagaacaaagttaaagatgagctgacggaactatgtttctcggatccaatggac
ctccacaggaggcttgatcgtgaaattctggtaactgagtccggcaaatttaaattgaag
cttcagaaagttgtggctagtcgtttcattttgccagaaatttgcaggtcatatatcgat
atcattgaaaggcagcttgaaatcagcgacttatctatgtcttcgcgtgtgctgttaatg
catcaagttactgtttgggagctgattagggtcttgttctctcagagagcagctggtaat
cagttggaatttagtggtgatgaggatcaggagggcatgattttggataagaaagaaggt
tctgcggacatagaccttgaagcactccctttggctaggagagcagactttagcaactgg
ttacaggacagtgtttgtcatcgggtacaaggagaggtgggctccttaagtgatgccagg
tacttggaacatattattctgcttctgactggtcgacaattggacactgctacagaaatt
gctgcttcaaggggtgatgtccggttggcaatcttgctaagccaggcaggtggatcgatg
ttaaatcgatctgatgttgcgcagcaactagatatgtggaaaataaatggtctggacttc
aattatattgaggaagacaggctaaaggtatatgagttgcttgctggtaatgtacacggt
gctttactagattcaccacttgactggaaaaggtaccttggtttaatcatgtggtatcag
ttatcaccagatacatcacttgatattctaattcattcttattaccaactacttggtgag
ggcaaagttccaaatcctgttcctgtatacattgatgaaggacctctcgaggaagcactt
cagtggtccccaggcgaccgtttcgacatatcattttatttgatgcttcttcatgccaac
caagatgagaagtttgggctgctaaaaactatgttcagtgcattctcgtcatcgtatgac
cccttggactaccatatgatctggcatcaacgctctattctggaagctattggagctttt
agtacaaatgatcttcatgtactggatttgagttttgttcatcagctactatgtcttggg
aagtgccattgggctatctacgtcattctgcacatgcagcatgtggatgatgcgccttac
atccatgaaaagttaatcagggaagttttgtcgcagtattgtgaaatatggagcaaagat
gaggctcagaggcaatatattgaagaacttggtataccagcagaatggatacacgaggct
ctggctctttatcatgagtactatggagaccggcagggtgcgctggagaattacattcaa
tgcggaaattggaagaaagctcatactattttcatgacatctgttgctcattccttgttt
ctgtcatcaaagcatcaagagatctgggacattaccaatgtattggagaatcacaagtct
gaaattgctgactgggacgttggtgctggaatatacatagactatttcattataaagaac
tctatgcaagaagatagtaccatggatgatgatgattcagatccacttgagacgaaaaat
gaatcatgccagagtttcttcatccggttaaatgattcgctgaatatctggggaagtaaa
ttacctgtagaggcgagggcatgctactcgaaaatggcagaggagctctgcgagcttcta
atgaactcccctggcgagggctcagcgccaagtctctacatgggatgctttgagacgatg
ctcaatgcccctgtccctgatgatcacagggcatcctacctgcaggaggcagtctccgtt
ttcaccgacatactttgccaggattcattctag
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integrated database retrieval system
