Lolium rigidum (rigid ryegrass): 124701614
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Entry
124701614 CDS
T09103
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124701614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124701614
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124701614
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
124701614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124701614
NCBI-ProteinID:
XP_047089667
LinkDB
All DBs
Position
1:complement(349863227..349868928)
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AA seq
1090 aa
AA seq
DB search
MAEIVDPAAAAALAAAEPEPEPLSAAAAAAAEDDDDDEEEGDVCRICRNRGDDEHPLRYP
CACSGSIKFVHQDCLLQWLDHSNSRQCEVCKHAFSFSPVYAQNAPTRLPFQELVFGVGMK
ACHVFQFVLRLAFVLSVWLMIIPFITYWIWRLTFVRSLGEAQRLFLSHISAQLILSDCLH
GFLLSAIIVLIFLGATSLRDYIRHLRELGGHEADRDDAGRERHGARAVRRLAGPNNRVPG
ADGNIDELAEAQGIGAGELLRRNAENVAARLERLEAQVEQMLDGLDDADGAEDVPFDELV
GMQGPVFHLVENAITVLASNAIFLIVVIFVPFSLGRIVLYYLSWFFSSASSPMLAKVMPF
TESAISLANETLNSAFNAMKNFSSDSHSEGVIGHVIEVVTQSLKINATALTVIQGTGKTS
LLKGTSIGSSYLSDLTTLAVGYMFIFSLVFLYIGSLALLRYARGERFTIGRLYGIAAILE
AIPSLCRQFFSGMKHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTLKMLGTTIAQRVEFF
TLSPLASSSIHWLVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPV
HKHARRVLLSVAVYGSLIVMLVFLPVKLAMRVAPSTFPLDITIFDPFTEIPVDVLLFQIC
IPFAIEHFKPRATIKALLHHWFAVVGWALGLTDFLLPKPEENGGQENWNGRAERRDRVHG
GREMVAPQLEQRMIQHDDGRGNANEANDVAEESDADDQGDSEYSFALRIVLLLVMAWMTL
LIFNAGIIVIPISLGRLVFEAVPRLPITHGIKCNDLFSFSIGCYIIWSAAAGTRYAIDYI
RSRRLAFLVQQICKWCSIVLKSSALLSIWIFIIPVLIGLLFELLVIVPMRVPIDESPVFL
LYQDWALGLIFLKIWTRLVMLDQMAPLVDESWRMKFERVREDGFSRLKGLWVLHEIITPI
VTKLLTALCVPYVLARGVFPVLGYPLIVNSAVYRFAWLGCLIFSTLFFCGKRFHVWFTNL
HNSIRDDRYLIGRRLHNFGEDSPRPISNEADDSRAPPGDEGQALIPLEDQEDDVGLRFRR
NHQQPMQVLD
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatcgtcgacccggccgccgccgccgccctcgccgcggccgagcccgagccg
gagccgctctccgccgccgccgccgccgccgcggaggacgacgacgacgacgaggaggag
ggcgacgtgtgccggatctgccgcaaccgcggcgacgacgagcacccgctccgctacccc
tgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctccagtggctcgac
cacagcaactcccgccagtgcgaggtctgtaaacacgccttctctttctcacctgtctac
gctcagaatgctccgaccaggcttcctttccaagagctcgtgttcggcgtcggaatgaaa
gcgtgccacgtgttccagttcgtcctgcggctcgcctttgttctctcggtctggctcatg
atcatccccttcatcacctactggatatggcgcttgacgtttgtcagaagtcttggtgaa
gctcaaaggctgttcttgagccatatcagcgcccagttgatcctcagcgactgcctacat
ggttttcttctctcggcgatcatcgtcctcatatttctcggagctacctctttgagagac
tatataaggcacttgagagagcttggagggcatgaagctgacagggatgacgcgggccgt
gaaaggcatggtgctcgagctgtcagaaggctagctggtcctaataacagggttcctggt
gctgatggaaatattgatgagttggcagaggcccaaggaattggtgctggggaacttctg
aggagaaatgcagaaaatgttgctgctcgattggaacgactagaggctcaagttgagcag
atgttagatggtttggatgatgctgatggtgcggaggatgttccttttgatgaactcgta
ggcatgcaaggcccagtattccacttggttgagaatgcaataacagttttggccagcaat
gctatattcctcattgttgtgatcttcgtaccattctcattgggaaggattgtcctgtac
tatctatcatggtttttctcttcagcctctagtcctatgctggctaaagtaatgcccttc
acagaatctgccatctctttggctaatgaaacattgaacagtgcatttaatgccatgaag
aacttctcttccgacagtcacagtgagggtgttattgggcatgtgattgaggtggttacg
cagtccttaaagataaatgccactgctcttactgtaattcagggcactgggaagacaagt
ttgctaaaaggaacatctatcggctcatcttatctttctgatctgacaactcttgctgtt
ggatacatgttcatcttttcccttgtgtttttgtacattggatcattggctttacttcga
tacgccaggggagaacgttttactattggaagactctatggtattgcagcaatcctagaa
gccattccatctctatgcagacagttcttttctggaatgaagcatctcatgactatggtc
aaagttgcattccttctggtgattgaacttggagtattccccctcatgtgcggttggtgg
cttgatgtctgcactctgaaaatgttgggtacaacaattgctcaaagagtcgaattcttt
acattgtcacccttggcgagctcctctatccattggcttgttgggatcgtatatatgctc
caaataagcatatttgtcagtcttcttcgaggggtactgcggaacggagttctttatttc
ttaagggaccctgctgatccgaattacaatccttttagggacttgattgatgatcctgta
cataagcatgcccggcgagtccttttatctgttgctgtgtatggaagcttgattgtgatg
ctggtcttcttacctgtcaaactggccatgcgagtagctccttcaacttttcctctggac
atcaccatttttgacccatttaccgagattccagttgatgtgcttctgttccaaatatgc
ataccatttgcgattgagcatttcaagcctcgtgcaacaattaaagctctgttgcatcat
tggtttgctgtcgttggctgggcgctaggcttaactgactttttactgccaaaacctgaa
gaaaatggtgggcaagagaactggaatggcagggcagaaagaagagatagggtacatggt
gggagggaaatggtagccccacagcttgagcagcggatgatacagcatgacgatggcagg
ggtaatgctaatgaagctaatgatgttgctgaagaatctgatgcagatgatcagggagat
tcagagtacagctttgcacttcggatcgtactcttgcttgtaatggcgtggatgacactg
ctaatattcaatgctggaattattgttattcctatctcacttggccgtctggtttttgag
gctgttccccgcctgccaatcacacatggcatcaagtgcaatgatctgttctcttttagc
attggttgctatattatctggagcgcagcagctggaacacgatatgcaattgactacatt
agatcacgacgtctggccttcctggtacaacagatctgcaagtggtgctctattgttttg
aagagctctgctctcctatcaatatggatcttcattattccggtgctgattggactcctt
tttgagctactggtgattgttcccatgagggtgcctattgacgagagcccagtttttctc
ttgtaccaggattgggctcttggtttaatatttttgaaaatatggactagactggtaatg
ctggatcagatggcacctttggtcgatgaaagctggaggatgaagttcgagagagtaaga
gaggatggcttctcccgactgaaaggtctctgggtcctgcacgagattatcacgcccatt
gtcacgaagctcctcaccgcgctttgtgtcccatatgtgctcgcgaggggcgtcttccca
gtgcttggctacccgctgatcgtgaactcggctgtctaccgctttgcctggctcggctgc
ctgatattcagcacactcttcttctgcggcaagcggttccacgtctggttcaccaatctc
cacaactccatcagggatgaccgctacctgatcggccggaggctgcacaacttcggcgag
gactcgccccgaccgatcagcaatgaagctgacgactcccgagcgccaccaggagatgag
ggccaggcgctgatccctttggaggaccaggaagatgacgtggggctgaggttcaggcga
aaccaccaacaaccgatgcaggttctcgattag
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