Lolium rigidum (rigid ryegrass): 124701738
Help
Entry
124701738 CDS
T09103
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124701738
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124701738
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124701738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
PhoH
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
124701738
NCBI-ProteinID:
XP_047089787
LinkDB
All DBs
Position
3:complement(67157407..67178350)
Genome browser
AA seq
2071 aa
AA seq
DB search
MLAPLPRLTGSLRAHFDADQAYLARKAVLQARTLPRPHDEWELARRIVPNWDDAPSDVRQ
AYKQFIGAVVELLNGEAVSEELQQVAQAVYRLFAAGSDTTDKPPLQKRNELERLVGYSVQ
DSVSKKLAQLAQKLRSLQRVNIQEFVQEDAKGVDGDDATEFGASFDFRAPARFVIDVDLD
DDLSFGKEQHDACGTSTSFSSNAVGGSVNLRWLKDQCDLITTSGGSMLSGDELAMALCRV
LRSNKPGDEIAGELLDMVGDAAFEIVQDLLSHRKELGDAIQHGLTILKSEKVSSNNQPKM
PTYGTQVTVQTESERQLDKIKRKEGRRGKRGAENGMGDFGVDDFSSLLLASERKLPFEDM
IGTGEGESSFQVTSLPQGTTRKHMKGYEEVKIPPTPTAPLKPNEKLIKIRELDDIAQAAF
QGYESLNRVQSRIFQAAYNTNENILVCAPTGAGKTNIAMIAVLHEVKQHFREGILHKNEF
KIVYVAPMKALAAEVTATFGRRLSPLNLVVRELTGDMQLTKNEIEETQMIVTTPEKWDVI
TRKSSDMALSMLVKLIIIDEVHLLNDDRGSVIETLVARTLRQVESMQSMIRIVGLSATLP
TYLEVAQFLRVNADTGLFNFDSSYRPVPLAQQYIGITERDYAKRNELFNSLCYEKVVESI
KQGYQALVFVHTRKDTGKTARTMIDLAAKAGEVELFSNADHPQYSLIKKDVSKAKSREVV
EFFESGFGIHNAGMMRSDRSLMERLFADGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYD
AKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTSQLPIESQFLG
SLKDNLNAEVALGTVTNVREACAWLGYTYLFIRMKTNPLVYGITWEEVIGDPSMGAKQRA
FIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYNEMLRRHMSESEVI
NMVAHSSEFENIVVREEEQDELEILARKACPLEIKGGPTDKHGKISILIQVYISRASVDS
SSLHSDAQYISQSLARIMRALFEICLRRGWSEMTSLLLEYCKAVDRKIWPHLHPLRHFDR
DLSPEILWKLEERNVDLDRLYEMEENDIGALIRFSHQGRLVKQYLGYFPYVNLSASVSPI
TRTVLKVDLLITPEFVWKDRHHGMSQRWLIIVEDSENDTIYHSELFTLTKKMARGIPTKI
SFNIPIFEPHPPQYYIRAVSDSWLHAESLFTVSFHNLTLPQTQITHTELLDLKPLPLSAL
GNKAYEDLYRFTHFNPIQTQAFHVLYHTDTNVLLGAPTGSGKTISAELAMLHLFNTQPDM
KVVYIAPLKAIVRERMNDWRKRLVTQLGKKMVEMTGDFTPDMMALLSADIIISTPEKWDG
ISRSWHSRGYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSIRFVGLSTAL
ANARDLADWLGVREDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHS
PDKPVLIFVSSRRQTRLTALDLIQLAASDEKPRQFLSIADNSLDMILSQVTDNNLRHTLQ
FGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTK
RYVDYVITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESNLREHLHD
HINAEIVSSTIGNKEEAIIYLTWTYLYRRLVVNPSYYGLEDTETYTLNSYLSRLVETTFE
DLEDSGCIKVDDHSVQSLILGKIASQYYLSYLTVSMFGSNIGPNTSLEAFVHILSAAAEF
DELPVRHNEDNLNRALCEKVPYSVDQHRLDDPHVKANLLFQAHFSRAELPMSDYITDLKS
ILDQSIRIIQAMIDVCANSGWLSSALTCMHLLQMIIQGLWFERDSSLWMLPSMNDNLLDH
LKGRGVSTVLNLLDRSGEELRKLLQPFAAPELSQDLQHFPRLDVNVKLQNEVKGQLKPPM
LNIRMQIKNSRRSSRAFSPKFPKVKQEAWWLVLGNVTSSELYGLKRISFADRVLNTRMKL
PQTFNAQETKLIVVSDCYLGFDQEVSLGHLA
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccgctccctcgcctgacaggctcgctccgcgcccacttcgacgccgaccag
gcctacctcgcccgcaaggccgtcctccaagcccgcaccctccccaggccgcatgacgag
tgggagctcgcccggaggatcgtgcccaactgggacgacgctcccagcgacgtgcgccag
gcgtacaagcagtttatcggcgcagtggtggagctgttgaacggggaggcggtgtccgag
gagctccagcaggtcgctcaggccgtgtataggctgtttgccgcggggtctgacaccact
gataagccgccccttcagaaaaggaacgaattggagcgccttgtgggctacagcgtgcaa
gattcagtttccaaaaagctagctcagctagctcagaagctccgttcccttcaacgggtg
aacattcaggaattcgttcaggaggacgccaagggtgtagatggagatgatgcgactgaa
tttggtgcaagctttgatttcagagcacctgcccgcttcgttatcgatgttgatcttgat
gacgacctatcgtttggaaaggagcagcacgacgcgtgcggcacgtccacaagctttagt
tctaatgctgttgggggttctgtgaacttgaggtggctaaaggatcagtgtgatctgata
actacaagtggtggctcgatgctctcaggagatgaacttgcgatggctttgtgtagagtg
cttcgttcaaacaaacctggcgatgagatagctggtgaactgttggacatggttggggat
gctgcctttgaaatagttcaagatcttctatcacataggaaagagctaggggatgcaatt
cagcatggattgacgatattgaaatcagaaaaggtgtcctcaaataatcaaccgaagatg
ccaacatatggcacacaagtaacagtacaaacagaatctgagcgtcagcttgataagatt
aagaggaaagagggaagacgtggtaaacgtggggcagaaaatggaatgggtgattttggt
gttgatgatttctcatcccttcttctggcaagtgaaagaaagcttccatttgaagacatg
attgggactggagaaggggagagtagttttcaagtaacttctcttcctcaaggaaccaca
aggaaacatatgaagggttatgaagaagtgaaaataccaccaactccaacagcgccattg
aaacccaatgagaaactgattaagataagagagttggatgatatcgcccaagctgctttc
cagggatacgagtcactcaaccgtgttcagagccgtatttttcaagccgcgtacaacacc
aatgagaatattctagtttgtgctcctacaggtgctggcaaaacaaatattgcaatgatt
gcagttcttcatgaggttaagcagcacttcagggaaggaattttgcataaaaatgagttc
aagatagtttatgttgcaccaatgaaggccttggctgcagaagtaacggcaacatttggt
cgtcgattatctccattgaacctggttgttagagaacttactggtgacatgcagttgaca
aaaaatgagattgaggaaacacagatgatagtgactactcctgaaaagtgggacgtcatt
acacgcaaaagcagcgatatggcactgtcaatgttagtcaagctgataatcattgatgaa
gtgcacctgctaaatgatgatagagggtcagtaattgagacactagttgctcgaactctt
cgtcaggttgagtccatgcaatcaatgattcgcattgttggcctatctgctacactgcct
acttacttagaggttgcacaatttttgcgagttaatgcagatactggccttttcaatttt
gactcaagttaccgtccagttcccctggctcaacagtacatcgggatcactgaaagggat
tacgccaagagaaatgaactattcaatagtctgtgctatgagaaggttgtggagtccatt
aagcaaggttatcaagcattggtttttgtccatacccgcaaggatacagggaaaaccgct
aggaccatgattgacctagctgcaaaagcaggggaagtggagttattttcaaatgcagat
cacccccagtattcattaatcaagaaagatgttagtaaagccaaaagtcgtgaagttgta
gaattttttgaatctggatttggcatacataatgctggaatgatgcgttctgaccgaagt
ttgatggagcgcctgtttgctgacggtctcctgaaagtccttgtttgtacagcaacattg
gcgtggggagtaaacttaccagcccatacagttgttataaagggcacacaactatatgat
gctaaagctggcggatggaaagatttggggatgcttgacgtgatgcagatctttggacgt
gctgggaggccacagttcgataaaagtggtgaaggaattattatcacaacacatgacaaa
ttggcttattacttgaggttattgactagtcagcttccgatagaaagccagttccttgga
tctttgaaagataatttgaatgctgaggttgccttgggtactgtaacaaatgtcagagag
gcatgtgcctggcttggctacacatacttatttatccggatgaagactaatcctctggtg
tatgggataacttgggaagaggtgattggagatccttccatgggtgccaagcaacgagca
tttattattgatgcagctcgtgcgctagacaaggctaagatgatgcgatatgacgaaaag
agtggcaacttttactgcacagagcttggcagaattgcaagccacttttaccttcagtac
tccagcgttgagacatacaacgagatgcttcgtcgtcacatgagtgaaagtgaggtgatt
aatatggtggcccattcctctgaatttgaaaatattgtagtaagagaagaagaacaggac
gaattagaaattcttgccaggaaagcatgcccattggaaattaagggtgggccgactgac
aagcatgggaaaatttcaattctgatacaggtttatatttcccgtgcctcagttgacagc
tcctccttgcactctgatgcccaatacattagtcaaagcttggctcgcattatgagggcg
ttgtttgagatttgtctgcgtagggggtggtctgagatgacatccttattattggaatat
tgcaaggctgtggatcgcaaaatatggccacatctccatccgcttaggcacttcgatagg
gacctttctcctgagatattgtggaaacttgaggaaagaaatgtggacctggatcgtctt
tatgagatggaggaaaatgatattggagctctgattcgtttttctcatcaaggaaggttg
gttaagcagtacctcggatacttcccatatgtgaacttatctgcttctgttagtccgatc
acgaggactgttcttaaagtggacttgcttataactcctgaatttgtgtggaaggatcgt
catcatggcatgtcacaacgatggttgattattgtggaggattctgaaaacgatactatt
tatcattcagagctcttcacactgacaaagaagatggccagaggaatacctacaaaaata
tctttcaatatacctatctttgaaccccatcctccgcaatactatatccgagccgtatca
gactcctggttgcatgcagagtcactctttactgtctcttttcataatcttaccttgcca
cagacacaaataacacacactgaacttttggacttgaagcctcttccactgagcgctctt
ggcaacaaagcgtatgaagatctgtacagatttacccatttcaatccgatacaaacacag
gctttccatgttctttatcacactgataccaatgtactcttgggagctccaacagggagt
ggaaagacgatttctgcagaactagcaatgcttcatctttttaacactcaaccagacatg
aaggtagtttacattgctcctctgaaggctatagtgcgagagcgaatgaatgattggaga
aaacgacttgtaactcagcttgggaagaagatggttgagatgactggtgactttacacca
gatatgatggcccttttatcagctgatatcataatttctacccctgaaaaatgggatggg
attagtcgtagttggcacagtagaggctatgttatgaaggttggactcatgatactagac
gagatacatcttcttggagctgaccgtgggcctattcttgaggtcatcgtatcaagaatg
cgatacatatcatcacaaacagaacgttcaattcggtttgttggtttatcaacggcacta
gccaatgctcgtgacttggctgattggttgggcgtcagagaagatggtctatttaatttc
aagcctagtgtgaggccggtacctcttgaagtacatattcagggatatcctgggaagttt
tactgcccgagaatgaatagcatgaacaaaccagcatatgcagccatatgcactcattca
cctgacaaaccagtcctcatttttgtgtcatcacgtcgacagacaagacttacagccctc
gatctcattcagcttgcagcatctgatgagaaaccaaggcagttcctcagcatagcagat
aactctctagacatgattctttcacaagtcactgataataatttgagacatacgcttcag
tttggaataggtctacatcatgcgggtctaaatgatagagataggtcgttggttgaggaa
ctcttctcaaacaacaagattcaggtactagtatgtactagcacactggcctggggtgtc
aatcttccagctcacctggtcataatcaagggtactgaatactatgatgggaaaacaaaa
agatatgttgattatgttattacagatattctgcaaatgatgggtcgtgcaggccggcca
caatatgaccaacatggcaaagctgttattcttgttcatgaaccaaaaaagagcttttat
aagaagttcctgtatgaaccgttccccgtggaaagtaatctgagggagcacttgcatgat
cacataaatgcagagattgtttctagcacaattggtaataaagaggaggcaattatttat
cttacttggacttacctatatcgcaggctggttgttaacccatcttactatggattggaa
gatactgaaacatataccttgaattcttacctctcgaggttagtggaaactacatttgaa
gatctcgaagacagtggatgcataaaagtggatgaccattctgtgcagtccttgattttg
gggaaaatagcatcacaatattaccttagttaccttaccgtctcaatgtttgggtcaaat
attggtcccaatacatcactggaagcctttgtgcacatactatcggctgcagcggaattt
gatgaacttcctgtacgtcacaatgaggataacttgaatcgagcactatgtgaaaaagtc
ccttattcagttgaccagcaccgcctcgatgacccacatgttaaggctaatttactcttc
caggcacacttctccagagcagaattaccaatgagtgactatatcactgacttgaagtca
attcttgatcagagcatacgtattatacaggctatgattgatgtatgtgccaacagcgga
tggctttcaagtgcattgacttgtatgcatctcttacaaatgatcatacagggtctctgg
tttgagagagattcatcgctatggatgttaccatccatgaatgataatcttctagaccat
cttaaaggtagaggtgtttcaacagttctgaacttgctagatcgttctggtgaagaatta
cgtaagctgcttcaaccgtttgcagcaccagagttgtctcaggatctgcaacatttccct
cgcctcgatgtaaatgtcaagttacagaatgaagttaaggggcagttaaaacctccgatg
ttgaatattagaatgcaaataaaaaattcacggcgttcgtcaagagcattttcccctaaa
ttcccaaaggtgaaacaagaagcttggtggttggtcctggggaatgttacaagctcggag
ctatatggtctgaagagaattagttttgcagatcgcgtgcttaacactcgcatgaaattg
ccacagacgttcaatgcccaggagacaaagctgattgtggtgtcagattgctaccttggg
tttgatcaggaggtctctcttgggcatctagcatag
DBGET
integrated database retrieval system
