Lolium rigidum (rigid ryegrass): 124701803
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Entry
124701803 CDS
T09103
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00450
Selenocompound metabolism
lrd00970
Aminoacyl-tRNA biosynthesis
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124701803
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124701803
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lrd01007
]
124701803
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124701803
Enzymes [BR:
lrd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
124701803
Amino acid related enzymes [BR:
lrd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124701803
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124701803
Prokaryotic type
Other AARSs
124701803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124701803
NCBI-ProteinID:
XP_047089855
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All DBs
Position
3:74412949..74419231
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AA seq
798 aa
AA seq
DB search
MASPPPPPPKLPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTATETKALEEKCSPKEICDKYHAIHDEVYKWFDIKFDKFGRTSSPQQTEVCQ
SIFHKLMENKWLAENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLL
NPTELIDPKCKVCKNTPRIRDTDHLFLELPLLSDKLVNYINNTSVAGMWSQNAIQATNAW
LKEGLKQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITASYTPDWEKWWKDPDN
VELFQFMGKDNVPFHTVMFPSTLLGTGENWTMMKTISVTEYLNYEAGKFSKSHGIGVFGN
DAKITNIPPEVWRYYLLMNRPEVSDTLFTWDDLQAKLNSELLNNLGNFINRVLSFVAKPA
GAGYDSIIPDAPNAESHPLTNALAEKTNKWVEQYLEAMEKVKLKQGLKSAMAISSDGNAY
LQESQFWKLYKEDPATCAIVMKTSVGVVYLLACLLEPFMPPFSREVLRQLNMSPDEDLTF
CDDKGDTAKAKRPWDFIPAGHKIGKPVPLFKELTNAEVEAFRSKFAGSQAERSSKAEADA
EAKKVADKLKGTKLSEGSSKKKQSGGSKSKTAEELSVSKLDIRVGLIRKAEKHPDADSLY
VEEIDVGEEAPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDH
TKVELVDPPESAVVGEKVTFAGHSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPF
STSAGVCKVKTIANGEIR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacccccgccgccgccgccgaagcttccgatccccggccgccggaacatactc
atcaccagcgcgttgccctacgtcaacaacgtcccgcacctcgggaacatcatcggctgc
gtgctcagcgccgacgtgttcgcgcggtactgccggctgcgggggtacaacgcgatctac
atatgcggcaccgacgagtacgggacggccaccgagaccaaggccttggaggagaagtgc
tcgcccaaggagatctgcgacaagtaccatgctatccatgacgaagtttacaagtggttc
gacataaagtttgacaagtttgggcggacttcctctccccaacagacagaagtctgccag
tcgattttccataaactgatggaaaacaaatggctcgcagagaataccatgcagcagctt
tactgtgacacgtgccaacgattcttagccgataggctcgtagaggggaaatgtcctaca
gaaggctgtaattatgaagcagcaagaggtgatcaatgtgaaaattgcagcaaattgttg
aaccctactgagttaattgatccgaagtgtaaggtctgtaagaatactccacgtattcgt
gacacagatcacttattcttggagcttcctctattgagtgataagttggtaaactacatc
aacaatacttcggtagctggcatgtggagtcaaaatgctattcaagcaacaaatgcatgg
ttgaaggaagggttaaagcaacgctgtatcaccagagatcttaaatggggagttcctgtt
ccacatgagaagtacaaagacaaggtgttctatgtttggtttgatgcaccaattgggtac
atatctatcacagcatcctatacgcctgattgggagaaatggtggaaggatcctgataat
gtagaattgttccagttcatgggtaaagataatgtgccatttcacacggtcatgttccct
tcaacactactgggaactggtgaaaactggacaatgatgaagaccataagtgttacagaa
tatttaaattatgaagcaggaaagttttcgaagagtcacggtattggtgtctttggtaac
gatgcgaagattacaaatattcctcctgaagtatggcgatactacttgcttatgaaccgc
cccgaggtatcagatacactgttcacttgggatgatttacaagctaaattgaacagtgag
ttgctgaacaacctgggaaacttcatcaaccgcgtgctaagctttgttgcgaaaccagct
ggagctggatatgactccatcatacctgatgctcctaatgctgagtcacatccactgacg
aatgcacttgcagaaaaaactaataaatgggttgaacaatatcttgaggcaatggagaag
gttaaactaaaacagggactgaagagtgcgatggcgatttctagtgatggaaatgcatat
ttgcaggagagccaattttggaagctttataaggaagatccagcaacctgtgccattgtg
atgaaaacttcagttggtgttgtctatctccttgcctgtctgctggagccttttatgcca
cccttttctagagaagtgctgcgacaattaaatatgtccccagatgaagatctgaccttc
tgtgatgataaaggagatactgccaaagcaaaaagaccctgggattttataccagcagga
cacaaaataggaaagccagtccccctatttaaggaactaacaaatgctgaagtggaggcg
tttaggagtaaatttgcgggcagccaagctgaaaggagctcaaaggcagaagctgatgct
gaagccaagaaagttgctgacaagctcaagggcacaaaattatctgagggtagttcaaag
aagaaacaatctggtggttcgaaatcaaagacagcagaggaactctcagtttccaagctg
gatattcgagtagggcttatcagaaaagcagagaagcatccagatgctgattcactttat
gtagaagagattgatgttggagaagaggcaccaagaacagtggttagcggccttgtgaaa
tacatccctcttgaagaaatgcagaaccggaaagtgtgcgtgctctgcaatcttaagcca
gtggcaatgcgcggtataaaatcacacgctatggttttggctgcatcgaatgaagaccat
acaaaggttgagttggttgatcctccagaatccgcagtcgtgggagagaaggtgaccttt
gctgggcactccggagagccagaggcttctcttaacgccaagagtaagacttgggaaaag
ttatccgctgacctgcacagcaacggcgagcttgtggcatgctacaaagatgttccgttc
tcaacttcggctggggtatgcaaggtcaagactatagcaaatggggagattcgttaa
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