Lolium rigidum (rigid ryegrass): 124701835
Help
Entry
124701835 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124701835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124701835
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124701835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
124701835
NCBI-ProteinID:
XP_047089886
LinkDB
All DBs
Position
3:77400162..77410682
Genome browser
AA seq
1463 aa
AA seq
DB search
MAWAEDEAIGPDVASAGLHISERIGRDAAAQPDLEEALEASRYASHPYSSHPKEWPPLVE
VAETRQLPPMLIERYNAAAGEGTALCGIFSELHRAWATVDNSFYVWRFDKWDGQCQEHHA
DEQAICAVGLARAKPGIFVEAIQYILVLATPVELILVGVCCSASADGTDPYAELSLQPLP
EYVISTDGVTMTCITCTDKGQIFLSGRDGHIYELQYTTGSGWRKRCRKVCLTTGLGSLLS
RWVVPNAFKFSAVDPIVDMVIDEERNTIYARTEGMKLQLFDLGASGDGPLKKITEEKNLV
DPRDAPYGGRRPNAPRAARSPKPSIVCISPLSAMESKWLHAVAVLSDGKRLFISTSGGSS
SSVGLNTGLQRPSCLKIVATRPSPPLGVGGGLTFGAVSAAGRAQPEDLALKVESAFYSAG
ALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFATASRSSRALRETVSALPVEGRMLCASD
VFPLPDAAFIMQSLYADVECLSAFSKPSEKTSIKLWAKGDLPTQHILPRRRIVVFNTMGL
MEVVFNRPVDILRKLFDGNTLRSQIEEFFNRFGAGEAAAMCLMLAAKLLYAEDSLISNAV
SEKAAEAFEDPGLVGMPQLNGTTALSNTRTQAGGFSMGQVVQEAEPLFSGAYEGLCLCSS
RLLYPVWELPIMVVRGLIGSNDHGDGVVVCRLSTGAMKVLESKIRSLETFLRSRRNKRRG
LYGYVAGLGDSGSILYKTGPTIGAGVRINGMSPYRIRDADTADQAALNKKPRSLYTSAEL
AAMEVRAIECLRRLLRRSGEALVLLQLICQHNVARLVQTLGNDLRRKLVQLTFHQLVCSE
DGDQLAMRLISSLMEYYIGPEGRGTVEDISTKLREGCPSYFNESDYKYYSAVENLEKASI
TNNNEERDVLAREAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQRAQALDSNAGV
INGQIDARHHDSITAQRVQCYEIVMNALRTLKGAGRSGKPGPMIALDPASRSKCIKQIIQ
LSVQWPDTAFHEHLYRTLIELGLDNELLEYGGSDLVAFLQSAGRKHQEEVRGAPPRLDDL
GAPISTTQTKYLELLARYYVLKGEHIAAARMLLILAERQCSNAEEAPALDQRYQYLSNAV
LQAKSAGITADSSRNPIDSSTVDLLEGKLAVLQFQMQIKQELESMALRLESVPSSSESPS
DPFPRDNIVADLESAKDAKDKAKELSLNLKSITQLYNDYAVPFNLWEVCLEMLNFANYSG
DADSKIAREIWARLLDQTLTRGGVAEACSVVKRVGSKLDPADGACLPLDIICLHLEKAAL
DRLSSGEELIGDEDVARALLGACKGVAEPVLAVYDQLLSNGAIVPSLNLKLRLLRSVLVI
LREWGMSVIAHKLGTTTAGASFFLDGTFSLNQTGSSKQGVRDKIISLANRYMTEVRRLNL
PQNQTDNVYRGFRDLEEKLLSPY
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggcggaggacgaggccatcggccccgacgtggcctccgcgggcctgcacatc
tccgagcggatcggccgcgacgccgccgcgcagcccgacctggaggaggcgctcgaggcc
tcgcgctacgcttcccacccctactcctcgcaccccaaggagtggcctcctctggtagaa
gttgctgaaactcggcagctacctcctatgctgattgaaagatataatgcagctgctggt
gaaggaacagccctttgtggaatattttctgaattgcaccgggcctgggcaactgttgac
aattcattttatgtttggcgctttgataagtgggatggtcaatgccaagagcatcatgcg
gatgagcaagcgatttgtgctgtcggacttgctagagcaaagcctgggatttttgttgaa
gcgattcaatacattttagtattagcaactcctgtggagctgatacttgttggagtttgc
tgttctgctagtgctgatggaacagatccatatgctgagctttcattgcaacctttaccc
gagtacgtgatttctactgatggtgtcacaatgacatgcatcacatgtacagacaagggt
caaattttcctgtctggacgtgatgggcatatatatgaattgcaatacacaactggttca
ggctggcgtaagcgttgccgtaaggtttgcttgaccaccggtttaggcagtcttctttcc
aggtgggtcgtgccaaatgcatttaaattctcagctgttgatcctattgtggatatggtc
attgatgaggagaggaacactatctatgcgcgcacagaaggcatgaaactgcaacttttt
gatttaggagctagtggtgatggtcctttgaaaaaaatcactgaagaaaaaaaccttgtt
gatccacgagatgcaccttatggcggtcgtaggcctaatgcaccaagagctgcacgatcc
ccgaagccatcaatagtatgcatatcacccttatcggccatggaatcaaaatggctccat
gctgttgctgttttatcagatggaaagagattattcatttctacatcaggtggaagtagt
tcttcagttggactgaacactggtttgcagaggccaagctgtttaaaaattgttgctact
aggccttccccacctctaggggttggtggtggactcacatttggtgctgtttctgctgct
ggcagagctcagccggaggatctggcattgaaagtggagtctgctttctattctgctggt
gctctcataatgtcagattcatctgctacagctatgtcctcccttctagctgtgcagaaa
gattctgctgcccagttatccctccccagtacctttgcaacagcttctagaagctctagg
gctctgcgagaaacagtctctgctttgcctgttgagggtcggatgctctgtgcctctgat
gtcttcccactcccagatgctgctttcatcatgcagtctttgtacgctgatgtggaatgc
ttatcagccttcagtaaaccttcggagaagacctcaataaaactgtgggccaaaggcgat
cttcctacccaacatatcttacctcggaggaggattgtagtattcaatacaatgggtttg
atggaagtagttttcaacaggcctgttgacatcctaaggaagttgtttgatggaaatacc
ttgagatcacaaatagaggagttctttaaccgcttcggtgctggagaggctgcagcaatg
tgcttgatgctagccgcgaagttactttatgctgaagatagtctgataagcaatgcagtc
tctgagaaagctgctgaagcatttgaggaccctggacttgttggaatgcctcaacttaat
ggcactaccgctttgtctaacactcgaactcaggctggaggatttagtatgggacaagtt
gttcaggaagcagaacctttgttttctggtgcatatgaagggctttgcttatgctcatcg
agactgctgtatcctgtgtgggaactcccaattatggtggttcgaggactgataggttcc
aatgatcatggggatggtgtggttgtttgcaggctctctactggtgccatgaaggttctt
gagagtaagattcgttcattggagacctttttgagatccagaagaaacaagagaagaggg
ctttatgggtatgttgctggactgggagattctggttccatactgtacaaaacagggcct
accattggcgctggtgtccgtatcaacggaatgagtccgtaccgtattagagacgcagac
actgcagatcaagctgcattgaataagaagccacggtcgctttatacatcagcagaacta
gctgctatggaggtgagggcaatcgagtgccttaggcggttgcttcgaagatccggtgaa
gcactcgttctacttcaacttatttgtcagcataatgttgctcgcttggttcagacatta
ggcaatgatttgcgcagaaagttagtgcagttaacgtttcatcaattggtatgttccgag
gatggcgaccaacttgcaatgcggcttatttcttcactcatggagtactacattggtcca
gagggcagaggaactgttgaggatatcagcactaaactgagggagggctgtcctagctac
ttcaacgagtcagactacaagtattactcagcagtggaaaatctcgagaaagcatctata
acaaacaacaatgaggagagagatgttcttgctagagaagccttcaatctcttgaccaaa
attccagactctgctgatttgagtgctatatgcaagcggtttgagaacctaaggttctac
gaggctgtagtgaggttgccgctacagagagctcaggcgcttgattccaatgccggtgtt
atcaatgggcaaattgatgcaaggcatcatgatagcataactgcacagcgtgtacaatgc
tatgaaatagttatgaatgctctgcgtaccctcaaaggtgctggacgaagtggaaaacct
ggtccaatgattgctcttgatccagcttctcgaagcaaatgtatcaaacagattattcaa
ctaagtgtccagtggccggacacagctttccacgagcatctgtacagaacacttattgag
ctcggtctggataatgaacttttggagtatggaggctcggatttggttgcttttcttcag
agtgctggccgtaagcatcaagaagaggttcgaggagctcctcctaggttggacgattta
ggtgcacctatttctactacccaaacaaagtatcttgagctcctagccaggtactatgtt
ctcaagggggagcatattgctgctgccaggatgctattgatattggcagaaaggcagtgc
tccaatgctgaagaagctcctgctcttgaccagaggtatcaatatctgagcaatgcagtg
ctacaggccaaaagtgcaggcattactgctgattcgtcgagaaatcctatcgatagtagt
acagtggatctacttgaaggcaaacttgcagtgcttcagttccaaatgcaaatcaaacaa
gaattggagtctatggctttgcggcttgaaagtgttccaagcagttctgaatcacctagt
gacccctttcctcgtgataatattgtagctgacttagagtctgccaaggatgcaaaggac
aaggcgaaagagctttcactgaatcttaagagtattacacaactatacaatgactatgca
gttccatttaatctgtgggaggtttgcctggaaatgctcaactttgcaaattactctgga
gatgctgatagcaagattgctcgggaaatttgggccagactccttgaccagacacttaca
agaggtggtgtagcagaggcatgttctgtggtgaagagagttggctccaaacttgatcct
gcagatggagcttgtttacctttggatataatatgccttcatcttgagaaggctgccttg
gataggttaagttcaggagaagaattaattggtgatgaggatgttgcaagagctcttctc
ggagcttgtaaaggtgtagctgaacctgtgcttgctgtgtatgatcagctgttatcgaat
ggcgcaattgtgccctcacttaatctgaagctgcgccttctgagatcagttcttgtaatc
cttcgtgaatggggaatgtcagtcattgcacataagctaggcacaacaactgctggggct
tcgttctttttggacggaacattttcgctgaatcaaacaggatcttccaagcaaggtgtt
cgagataaaataattagtttggccaacaggtatatgactgaggtgaggcggttaaacctt
ccacagaaccaaacagataatgtctaccgaggtttccgtgacctagaggagaaattgttg
tccccttattag
DBGET
integrated database retrieval system
