Lolium rigidum (rigid ryegrass): 124701841
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Entry
124701841 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124701841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124701841
03036 Chromosome and associated proteins [BR:
lrd03036
]
124701841
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124701841
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124701841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
124701841
NCBI-ProteinID:
XP_047089895
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Position
3:78084756..78091320
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AA seq
1294 aa
AA seq
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MFSPAIRKPHLVHRREREEATPSPPPPAPAHSPSPGGFALSNRPATGTPAPWTSSSLLAR
ISTSKQTDRAGDSDQIQPVRVAEFPQIVRNAQASLLQKNFSGKNTLVGGIDKETSLAWMI
CGNELYIWSYLSSVSKDCLVLDVPSSLMGNKDTESLCGNQWTLCIMRWGSSTATRKSEEM
LHRRSSTGVILCNRRTQAIAYWPDIYDESSKSPALSLFDHSVTSPSDGISACYRFNSLIA
TSIPGGIRECIAIASEPTGALWLFQCSPAGILRREVHRDTLGDNGTDHHQRNDGGRSLAW
LPSDISSEAADRKFFLLTNHGIQCWSISLLHGNNVKKLLSQEIVGTDGELGIKRDIAGQK
NIWLLDMQIDEHGKEFSILVATLCKDRVSGSNYTQYSLLTMLYKSNQKFSSEDNVAKCER
FLEKKAPSQVIIPKARVEDEDFLFSMRLKSGGKPSGSVIILSGDGTATVAIYWRGSTRLY
QFDLPWDAGKVLDASIIPSAEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRK
GSCNEAVAEEKRRSQAFSASVVPRRVSSEAWSSGDRQRPAFTGIAQQVVVDEEAEMLLNR
LFHDFILSGAVHEALQKLRVAGAFEKEGEMNVFVRVSKSIVNTLSKHWTTTREAEFLAST
IVSSLSEKRQKHEKFLQFLVVSKCHEELSSKHRAAMLSVMEHGEKLSGVIQLRELQNALI
QQRSSTHLSPQSKTPTAGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIEDLFYC
LSHQLRYIITGEEHPSVQMQHALELSNACVTLVQAALYYREEHKDWYPSPEGLITWNSQP
VVRSGIWTLASSVMELLREPGAADMPMKSNLWSQLEGLTDMLLEGYMGLLTAKFERGEEH
GGLVQEYCERRDELLGSLYDLAKQIIEAKYQESREGNDNLDLKESIFREVTSPILATAKR
HEGYQTLWQICYDISDTVLLRNLMHDSVGPHGGFSFYVFKQLINNGQHAKLLRLGEEFQE
ELASFLKDRKDLLWLHEIFLNQFSTASETLHTCALRLSSGEDADLTSNRKSMSFVERRRL
LYLSKIAATAGKDVDYEMKVARIDADIRILKLQEEIVQHDPEYAQGKYTGKLLRPSELIE
MCMKGDRELSLKAFEVFAWTSSSFRSSNRGLLENCWTNAANQDDWVQLSQASISEGWSDE
VTQESLQGTALFNASRLCYSQDAVVFDGTFEEVLPVRKEDVYARGVESKCFSVEEVLMQH
DVFPDAGKLMMTAVVMGKELSYTEPADEPVEMDS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccccacctcgtccaccgcagggagagagaggaggcg
acgccttcaccaccacctcctgctcccgcccactccccatcgcctggtggatttgcgctc
tccaatcgccccgccaccggcaccccggccccatggacctcctcctccctcctcgccagg
atttcgacatccaagcaaacagacagggctggcgattctgaccagatccaaccagtgcgt
gtagcagagttcccccaaatcgtgaggaatgcacaagccagccttctgcagaagaatttt
tctggcaaaaacacgcttgtaggtggcattgacaaagaaacatcgcttgcatggatgata
tgtggaaatgagctttatatctggagctacttgtcttctgtttccaaagattgtcttgta
ctcgatgtcccgtcttctcttatgggaaacaaagacacagagtccctctgtggtaatcag
tggacgctttgcatcatgagatggggtagtagtactgcaacaaggaagagtgaagaaatg
ttgcatcgaagaagttcgaccggtgttatcctctgcaacagaagaacacaagctattgct
tattggcctgatatctatgatgaaagtagcaagagtccagctcttagtttatttgaccac
agtgtcacatctccaagtgatggtatatctgcatgttacaggtttaactcgctaattgca
acttccattccaggaggcattcgtgaatgtattgcgatagcttctgagccaacaggcgct
ttatggttgtttcagtgttcaccggcagggattcttcgaagagaagttcatcgtgataca
ttaggagataatggtactgaccatcatcagagaaatgacggtggaagatccctggcttgg
ctaccaagtgacatatcatcggaggctgctgaccggaaattctttttgttgactaaccat
gggatacaatgttggagcatctcactcttgcatggcaacaatgtaaagaaattattatct
caggaaattgttggtactgatggggagctgggcataaaaagggacatagctggtcagaag
aacatttggcttttggacatgcagatagatgagcatgggaaggagttcagcattcttgtc
gctaccttgtgcaaagatcgggttagcgggtcaaactacactcagtattctcttctgaca
atgctgtacaaatcaaaccaaaagttctcatctgaagataatgtggctaaatgtgaaagg
tttttggagaaaaaagctccttctcaggtgataatccctaaagctcgagtggaggatgaa
gattttttgttctccatgaggcttaaaagtggtggtaaaccttctggttcagtgatcatc
ctatcaggtgatggaacagcaacggtggccatctattggagaggttctacccgactctat
caatttgatctgccttgggatgctggaaaggttttggatgcttccatcatcccatctgct
gaggacagagatgaaggagcttgggttgttctgacagaaaaggcaggagtctgggcaata
cctgaaaaggctgtattagttggtggggttgagcctccagagcgcagcttatcacgaaaa
ggtagctgtaatgaagcggttgctgaagagaaaaggagaagtcaggcattcagcgccagc
gttgttcccagaagagttagctctgaggcttggagttctggtgaccggcaaaggccagca
ttcactggcatagcccaacaggttgtggttgatgaagaggctgagatgttactcaatcga
ttgtttcatgattttattttgtctggcgcagttcatgaggcacttcaaaagcttagagtc
gcaggagcatttgagaaagagggtgagatgaatgtatttgttcgagtaagcaaatccatt
gtaaacacattatctaagcactggacaactactagagaagctgaatttcttgcttcaaca
attgtttcatccctttccgagaagaggcaaaaacatgagaagttccttcaatttcttgtc
gtgtccaagtgccacgaagaactctcgtccaaacatagagctgcaatgctaagtgtcatg
gaacatggagaaaagctctctggggtgatccagctcagagaattacaaaatgcgcttatc
cagcagcgctcaagcacacacttatcacctcagtccaaaaccccaactgctggtgcactt
tggaatctcattcagttggttggtgagaaagctcgtcggaacactgttctattaatggat
cgtgataatgctgaagtgttctacagtagagtttctgatatagaggatctattttactgt
ttgtcgcatcaacttcggtatattataaccggagaagagcacccatctgttcagatgcaa
catgcacttgagttatcaaatgcttgtgtcactttagttcaggcagcattgtactacaga
gaggagcacaaggattggtatccttctcctgaaggactgataacatggaacagtcagcct
gttgtgcggtctgggatctggactctggcatcatctgtgatggagcttttgagagagcca
ggagctgcagatatgcctatgaaatctaatctatggtctcagctggaaggactcacagat
atgctattggagggatatatgggcctgttaacagccaaatttgaacgtggggaggaacat
ggtgggctagtccaagaatactgtgaaaggagagatgagcttcttggatccctttatgac
cttgcaaaacaaattatagaggcaaaatatcaggagtcaagagaaggcaatgacaatctt
gatctgaaagaatctatatttagagaggttacttctcctattttggcaacagctaaacgg
catgaagggtaccaaacgttgtggcagatttgctatgatatcagtgatacggttctcctc
cgcaatcttatgcatgatagtgtaggacctcatggcggattcagtttctacgtttttaaa
cagctaatcaacaatggacagcacgctaagttgttaaggctgggtgaagaattccaggaa
gagctagctagttttctgaaagaccggaaagatctattgtggcttcacgagatattctta
aatcagttctcaactgcttcagagactcttcatacctgtgctctacgtctgagttccggg
gaagatgctgaccttacaagcaacagaaagtcgatgtcctttgttgaaagaagacgtctt
ctctatctctccaaaattgctgcaacagcaggcaaggatgttgattacgaaatgaaggtt
gcacggatagatgctgatatccggattctaaaacttcaggaagagattgttcagcatgat
ccagaatatgcacagggtaaatatacaggcaagcttcttcgtccatcagaactgatcgag
atgtgcatgaagggagatcgggagctctctctcaaagcttttgaagtgtttgcctggaca
agctcctcattccgaagctccaacagaggcctgctagagaactgctggacgaacgcagcc
aaccaggatgactgggtccagctctcacaggcatccatttcggaagggtggagcgacgag
gtcacccaagaatctcttcaaggaacggccctcttcaacgcctctaggctgtgctatagc
caagacgcggtggtgtttgacggcacatttgaggaggtgctgcctgtgaggaaagaggac
gtgtacgcgagaggcgtggagagcaaatgcttctcggtggaggaagtgctgatgcagcac
gatgttttcccggatgctggtaaactgatgatgacggcagtggtaatgggcaaggagcta
tcgtacactgaaccggcagatgaacctgtggagatggactcgtga
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