Lolium rigidum (rigid ryegrass): 124702003
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Entry
124702003 CDS
T09103
Name
(RefSeq) RNA-binding protein 208
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124702003
03041 Spliceosome [BR:
lrd03041
]
124702003
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124702003
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124702003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
124702003
NCBI-ProteinID:
XP_047090087
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All DBs
Position
1:complement(100102602..100107658)
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AA seq
448 aa
AA seq
DB search
MNGAGGSQQQQQQQRLRQQQQQQQQQQALLMQQALQQQQYQSGVLAAAAAAAMTQMEPVS
NGNLPPGFDPSTCRSVYVGNVHPNVSESLLIEVFQSTGPVERCKLIRKEKSSFGFVDYYD
RRSAAISIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFS
TYSSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA
EEKQEADNHNTVVLTNGSSSNAAMESNQDTGSKENPENNPDFTTVYVGNIGHEVNRDELH
RQFYNLGVGAIEEVRVQQEKGFGFVRYSTHGEAALAIQMANGLVVRGKPLKCSWGNKPTP
PGTSSKPLPPPVASYQPVAMAGVPQGFSTAELLAYQRQLALSQAAAGQLAGQHGLAGQVS
AGLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgccggcgggagccagcagcaacagcagcagcagaggctcaggcagcagcag
caacagcaacagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagtat
cagtccggcgtcctcgccgccgccgccgccgcggccatgactcagatggagcctgtttcg
aatggcaatctcccacctgggtttgatccatccacatgccgcagtgtgtatgtgggaaac
gtacaccctaatgtcagtgaaagccttctgattgaagttttccagagcactggtccagtg
gaaagatgcaagctcattcggaaagaaaagtcttcttttgggtttgttgattactatgat
cggagatcagcagctatttcaatcatgacccttcatggacgtcacatatacggtcaagca
attaaggtgaattgggcgtacgcaagtacacagagagaggatacatctgggcatttccat
atttttgttggtgatttaagttctgaagtgaatgatgcaaccctttatgcctgtttctca
acatattcttcttgttctgatgctcgagtcatgtgggacaataaaactggacgctccaga
ggttatggctttgtctccttccgcaatcaacaggaagctgaaactgctataactgaaatg
actggtaaatggcttggcagcagacaaattaggtgcaactgggcaacaaagactaatgca
gaagagaagcaggaagctgacaatcataacacagttgtactaacaaatggtagttcgagt
aatgcagcaatggagtcgaaccaggatacgggaagtaaagagaatccagagaacaatcca
gatttcactacggtgtatgttggcaacattggacacgaggttaatcgggatgagcttcac
cgtcaattctacaacttaggggttggggctattgaggaagttcgtgttcaacaggaaaaa
gggtttggatttgtaaggtatagtacccacggcgaagcagcattagctattcagatggcc
aatggcttggttgttcgtggcaagccactaaagtgctcgtggggcaataaaccaactccg
cccgggacatcttcgaagccactgccaccgccggttgcttcttatcagcccgtagcaatg
gccggtgtgccacaaggcttctcaacagctgaacttctggcttaccagaggcagctcgcc
ttaagccaggccgcggccgggcagctcgccggacagcacggtctcgctggtcaggtatcc
gcggggctccttgctgctggttcccaggctctctacgatggctacccaaaccagtcgtcg
gcgcagcagctgatgtactacaactag
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