Lolium rigidum (rigid ryegrass): 124702097
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Entry
124702097 CDS
T09103
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124702097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124702097
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124702097
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
U-box type E3
124702097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
KAP
MLKL_N
Arm_2
zf-C3HC4_4
zf-RING_UBOX
Neurochondrin
zf-C3HC4_2
zf-Nse
U3snoRNP10
PaREP1
T3SS_ATPase_C
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124702097
NCBI-ProteinID:
XP_047090160
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All DBs
Position
3:105165316..105171455
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AA seq
707 aa
AA seq
DB search
MDEDAKPNNTGEEASAEAAAAAPATTAAEAASAGPESDDVGDLVEKVAELVDEIAAISDF
RNAYRRQFCNLSRRIRLLAPMLEEAKEGPRPLPEASVAALRQLRDALAAAKDLLRLGSTG
SKIFLVLQRDKIMQTFQDITSRLEQALAGISFDELGISDEVREQVELVHAQFKRAKERPD
TSDDILFNDLISVYNSSATAIVDSDILRSLSEKLQLVTISDLNQESLTLHEMASGGDPGA
VVENVSMLLKKIKDFMQTQDPVIGIAESAANLSPNDNSTFPVVPDDFRCPISLDLMKDPV
IVSTGQTYERGCIERWLEAGHDTCPKTQQKLPNKSLTPNFVLRSLIAQWCEANGVEPPKR
PAQQSNAPATCTASEHSKVIELLQKLSSQNLADQRAAAGMLRQLAKRSAENRACIGEAGA
IPILVSLLPTTDVSTQEHVVTAILNLSIYEENKARIVTSGAVPGIVHVLKRGSMEARENS
AATLFSLSLVDENKVMIGASGAIPALVLLLGNGSQRGKKDAATALFNLCIYQGNKGKAIR
AGLVPILLELLTETESGMVDEALAILAILSSHPEGKAAISSAAAIPILVGVIRNGSARNK
ENAAAVLVHLCNGEQQQQHLAEAQEQGIVTLLEELAESGTDRGKRKAIQLLERMNRFLKQ
QSQAQGDAMAQALAQAQTPSQALVQALLADAQLEEPLLPNSSHLPER
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgccaagcccaacaacactggcgaggaggccagcgccgaggccgctgct
gccgcgccggccaccactgcggccgaggcggcctccgccggtccggagtcggacgatgtg
ggggatttagtggagaaggtggcggagctggtggacgagatcgccgccatctccgacttc
aggaacgcgtaccggaggcagttctgcaacctctcgcgccggatccggctgctcgcgccc
atgctggaggaggccaaggaggggccgcgcccgctgccggaggcctcggtggcggccctg
cgccagctcagggacgcgctcgccgccgccaaggacctgctccgcctcggcagcaccggc
agcaagatcttcctggttctccagagagacaaaataatgcagactttccaggacattacc
tcgaggcttgaacaagcgttagctggtatctcgtttgatgagcttggcatatcagatgaa
gtaagggaacaggttgaactggtccacgctcaattcaaaagggcaaaagaacgacctgat
acatctgatgacattctttttaatgatctaatatctgtctacaattcaagcgccactgct
attgttgactcagatattcttcgaagtttatctgagaaattgcagcttgtcaccatatct
gacctcaatcaagaatcattgaccttgcatgagatggccagtggaggggaccctggcgcg
gttgttgagaatgtttcaatgcttctgaaaaagatcaaggattttatgcagactcaggac
cctgtaataggcatcgcagaaagtgcagcaaacctttccccaaatgacaactcgacgttt
cctgttgttccagatgatttccgctgcccaatatcccttgatttaatgaaagacccagtt
attgtctccactggacagacgtacgagcgaggttgcatagagagatggttggaggctggg
catgacacctgtcctaagacgcagcagaagcttcccaataaatcgttaactccaaacttt
gtccttcgaagcctcatagctcaatggtgtgaagcaaatggcgtggagccgccaaagcgc
cctgctcaacaaagtaatgcaccggcaacatgtaccgcttctgagcatagtaaagttatt
gagcttctccagaaactgtcatcccagaatcttgcagaccaacgtgccgctgcaggtatg
cttcgtcagcttgccaagcgtagtgctgaaaatcgtgcttgtataggagaagctggtgct
attcctatccttgtgagccttctaccaaccaccgatgttagcactcaggaacatgtggtt
actgctattctgaatctttctatttacgaagaaaacaaagcaagaatagttacctctgga
gctgttcctggaatcgtacatgtgctgaagaggggcagcatggaagcccgggagaattca
gctgccacactatttagcctatcacttgtggatgagaacaaggtgatgattggggcttct
ggggcaattccagctttggtactgctattgggtaatggaagtcaacgcggtaaaaaggat
gcagcaactgcattatttaacttgtgtatctatcagggcaacaaaggtaaagctatcaga
gctggattggtcccgatactgcttgaacttctaacagagactgaaagtggaatggtggat
gaggcccttgctattctagcaattctctcgagccatcctgagggcaaggcagctattagc
tctgcggccgccataccaatcctggttggggttatcagaaatggatccgcaaggaacaag
gagaatgcagcggctgttctagtgcatctctgcaatggagaacagcagcaacagcatctt
gcggaagcgcaggagcagggcatcgtgaccttgctggaggagctagcagagagcggcaca
gacaggggcaaaaggaaagcgatccagctgctcgaacggatgaataggttcttaaagcag
cagagccaagcccagggagacgcgatggcgcaggcgctcgctcaggcccagaccccgtcc
caagctctggttcaggctcttctagcagatgctcagctagaggaaccactgcttcccaat
tcttcgcatcttcctgaaaggtga
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