Lolium rigidum (rigid ryegrass): 124702243
Help
Entry
124702243 CDS
T09103
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124702243
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124702243
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124702243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_long
PRORP
TPR_24
PPR_3
PPR_2
RNase_Zc3h12a
Motif
Other DBs
NCBI-GeneID:
124702243
NCBI-ProteinID:
XP_047090320
LinkDB
All DBs
Position
3:complement(121107726..121119218)
Genome browser
AA seq
589 aa
AA seq
DB search
MRLAAAAAALRSTAAALLIRSRPHPLPSSLHRSSLPLARRRRHSYSSTSTALDDPPATTA
PPNVPPSPALPPPAEQGGGRKAVRRRMHNSPEGLLMHKLDICSRDADLPTALALYDAALH
PATAIPLSLNHYNRLLYLCSTAAAAESADAARRGFEIFARMEAQGVEPNEATLTSVARLA
AARRDPATAFSLVRRVAAAGTPPRLRTYGPALFAYCDAGDADGAGEVEAHMDAAGVVPEE
TELAALLRVNANKGKAGEVYRVLHRTRSLVRQVCETTAEVVEAWFRSDAAAAAGVEKWDT
GKVREGVVKGGGGWHGQGWLGKGQWDVGRSEMDKNGKCQRCGEKLVCIDIDPSETETFAK
LLTQLACKREVRENFPRFQEWLRRHGPFDAVIDAANVGLYNNKTFNFSQVNSVVNGIQRI
TKSKKLPLIVLHRSRVNGGPAKLPQNQKLLEGWRNAGALYPTPPGSNDDWYWLYAAVSCR
SLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTYSGRGPTFHLPPPYSIVTQESETGSW
HVPTTTGDDIENPRQWVCATRKSSVVCATTKTSEESSARPKARLSEMGW
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgctgcggcggcggcggccctccgctccacggcggcggccctcctcatccgc
tcccgcccacaccccctcccctcctctctgcaccggtcctccctccccttagcccgccgc
cgccgccactcctactcttccacctccaccgcgctcgacgaccctccggcgacgactgcg
cctcccaatgttccaccctcccccgctctaccaccgcctgcagaacagggtggcggaaga
aaggccgtccgccggcgcatgcacaattcccccgagggcctcctcatgcacaagctcgac
atctgctcccgcgacgccgacctccccaccgcgctcgccctctacgacgcggcgctccac
ccggccaccgccatcccgctctccctcaaccactacaaccgcctcctctacctctgctcc
accgccgcagccgccgagtccgccgacgccgcccgccgcggcttcgagatcttcgccagg
atggaggcccagggcgtggagcccaacgaggccaccctcaccagcgtcgcccgcctcgcc
gccgcgcgccgggaccccgccacggcgttctccctcgtccgccgcgtggccgccgccggc
accccgccgcgcctccgcacctacggccccgccctcttcgcctactgcgacgcgggggat
gccgacggggccggcgaggtcgaggcccacatggacgccgcgggggtggtgcccgaggag
accgagcttgccgcgctgctccgcgtcaatgccaacaaggggaaggccggcgaggtgtac
agggtgctgcacaggacgcgctcactcgtcaggcaggtgtgcgagacgaccgccgaggtt
gtcgaggcgtggttccggtcggacgctgctgcggcggcgggagtggagaagtgggacacc
ggaaaggtcagggaaggggtggtgaagggcggcggcggctggcatggccagggctggctt
ggtaagggacaatgggacgttgggcggagcgagatggacaagaacggtaaatgtcagcgt
tgcggggagaagcttgtgtgcatagacatcgatccttctgagacagagaccttcgccaag
ttgctcacccaactcgcatgcaagcgggaggtcagggagaatttcccacggtttcaggaa
tggctccgtcgccatggaccattcgatgctgttatcgatgctgctaatgttggcctttac
aataacaaaacattcaatttttctcaggtgaactctgttgtaaatggcatacagagaata
actaaatcaaagaaattgccactgattgttttgcataggagccgagttaatggtggtcct
gcaaaacttccacaaaatcagaagctcttagagggttggcgaaatgctggagcattatat
cctactcctcctggttccaatgatgattggtattggctgtatgcagcagttagttgccgt
tcgctgcttgttacaaatgatgagatgcgggatcacctgtttcaacttcttggcactagt
tttttccccagatggaaagaaaagcaccaggtccggctaacatactcagggcgtggtcct
acttttcacttgccacctccttattccattgttactcaggaatctgaaactggaagctgg
catgtaccgacgacaaccggtgatgacattgagaatccacggcagtgggtttgtgccact
aggaaatcttcagtggtttgtgcaactacgaaaacttcggaggaatcatctgctcggccg
aaagcgaggttaagcgagatgggctggtag
DBGET
integrated database retrieval system
