Lolium rigidum (rigid ryegrass): 124702305
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Entry
124702305 CDS
T09103
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124702305
Membrane trafficking [BR:
lrd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124702305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
124702305
NCBI-ProteinID:
XP_047090386
LinkDB
All DBs
Position
1:354833369..354846796
Genome browser
AA seq
1859 aa
AA seq
DB search
MDDSATASGEGQRFRRVPRQYRGGRNLELDPLLNENLEQWPHLNDLVQCYKADFVKDDGK
YGRYESVTPPFFQNQIFEGPDTDMETELQLCNARQPKTEESIEDDMPSTSSGRQTYGAEP
FASSSKKHCTLSPLPAYEPAFDWDNERSLIFGQRVPESLPVTHSSGLKITVKVLSLSFQA
GLVEPFSGTICLYNRDRREKLSEDFYFHILPKEMQDVRSNGHISLDRRGIFSLDAPSPSI
CLLIQLEKSATEEGGVTPSVYSRKEPVHLSEKEKQKLQVWSRIMPYREPFAWAMIPLFEN
NHAAGAGDAASPSSPLAPSMSASSSQDSIVEPVSKLTLDGKLNHYSSGSSVIVEISNLNK
VKESYIEDSLQDPKRKVHKPVKGLLKLEVEKLHNDRNDVDNMSEGGIMTNELHDAGELSN
GRHSRNNIDGIHSSHCSGGTVKKETHQNGQSSSAENGNNFQAFDFRVMARSEPFSQLFHC
LYVYPLTVSLSRKRNLFVRVELRKDDSDIRKPPIEAVHPRDQDTTMQKCAHTQISVGTRM
SCYHDEVKISLPALLTPQHHLLFTFFHVDLQMKLEAPKPVVVGYAALPLSTHIHLHTIYF
YFWGNTFSSMLLSDVSLPILRELVPHYLQESGKERMDEEGKTVFRLRLRLCSSLFPVNER
IRDFFVEYDRHTLHTSPPWGSELLEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETL
QVAAFRAMVNILTRVQQESSDGAERNRFLVNYVDFAFDDFGDRQTPVYPGLSTVWGSLAR
SKAKGYRVGPVYDDVLAMAWFFLELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKEGVFRC
IMQLFDCLLTEVHERCKKGLNLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGV
CQSVLHDCKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAA
RILVVLICKHEFDARYQKNEDRLYIAQLYFPLIGQILDEMPVFYNLNAIEKREVLVVILQ
IIRNLDDATLIKAWQQSIARTRLFFKLLEECITHFEHNRTGDSLLLGSSSRSPDAERPAS
PKYSDRLSPSVNAYLSEASRHEIRPQGTPENGYMWNRISPQLSSPNQPYSLREALAQAQS
SRIGSTARALRETLHPMLRQKLELWEENLSTAVSLEVLGTVDKFSVAAASRSISTDYAKL
DCITSILMGLLSRSQPLTFWKAFLPVVYNIFSLHGATLMARENDRFLKQIAFHLLRLAVF
RNDSVRKRAVVGLQILVRNSFNYFKSTTRLRVMLTITLSELLSDVQVTQMKSDGSLEESG
EARRLRKSLEEMADVRSKDQLNDCGLPVTALEVAAEGSTDNNWSWVEVKHLSKCLVQALD
AGLEHALLGSAMTVDRCAAAEGFYKLALAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQC
AVAVAGVIMQALVGRNDAVWSKDHVASLCRICPIVGTDIGAEVAAAEVEGYGASKLTVDS
AVKYLQLANKLFAQAELYHFCASIQELIIPVYKSRRSYGQLAKCHTSLTSIYESILEQEA
SPIPFSDATYYRVGFYGELFGKLNKKEYVFREPRDVRLGDIMEKLSHTYEVKMDGGHTLH
IIPDSRQVNAEELQPGVCYLQITAVDPVMEDEDLESRRERIFSLSTGTVRARVFDRFLFD
TPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLIVIKSESLEFSPVENAIGMIETRT
GALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQE
LQQLIAALLEFMAVCKRAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggacgattccgcgaccgcgtcgggggaagggcagcggttcaggcgggttccgaggcag
taccgcggcgggcggaacctggagctggatccactgctcaatgaaaatttggagcagtgg
ccacacctaaatgacctggtacagtgttataaggctgatttcgtgaaagacgatggcaag
tatggacgctacgagagcgtcacgcctccgttctttcagaatcaaatcttcgagggacct
gacaccgacatggaaacagaattacagctttgcaacgctaggcaacccaaaaccgaggaa
agcattgaagatgatatgccgagcacctcgtcagggaggcaaacatatggggctgagccg
tttgcttcatcttctaaaaaacattgtactctctcacctttaccagcatatgaacctgca
tttgattgggacaacgagagatctttgatattcggccaacgtgtgccagaaagtctccct
gtaacacacagcagtggattgaagataactgtcaaggtattatctttgtcattccaagct
ggattagtcgaaccttttagtggtacaatctgcttgtacaacagagataggagagaaaag
ctatcggaagacttctactttcacatacttccaaaagaaatgcaagatgtaaggagcaat
ggccatatttctttggaccgtcgaggtattttctcattggacgccccttcaccatctatc
tgcctcctgatccagctagaaaagtctgctactgaagaagggggagtaactccttctgtt
tattcccgtaaagaacccgtacacttgagtgagaaagagaagcagaagctgcaagtttgg
tctcgaatcatgccatatagagagccatttgcgtgggcaatgattcctctgtttgaaaac
aaccatgctgctggtgctggtgatgctgcctctcctagcagccctttagcaccaagtatg
tcagcctcaagttctcaagatagcattgtggagcctgtttccaagctcactttagatgga
aaacttaaccattattcaagtggaagctcagttatcgtcgagatatcgaacttaaacaaa
gtgaaggaaagctacattgaggactccctccaagacccgaaacggaaagtacacaaaccc
gtgaaaggtctgctgaagttagaggtggaaaaacttcataatgatcgtaatgacgttgat
aacatgtctgaaggtgggatcatgaccaatgaattacatgatgctggtgagctcagcaat
ggcagacacagcaggaataacattgatggaatccacagttctcattgttctggtggcact
gtaaagaaagaaacacaccagaatggtcaaagttccagtgcagagaatggcaacaatttt
caagcttttgacttccgggtgatggcccggagtgaaccattttcacaacttttccattgc
ctctatgtgtacccattgactgttagcttgagccgcaaaagaaatctatttgtaagagta
gaattgagaaaggatgattctgacatacgtaaacctccaatagaggctgttcatccaagg
gaccaggatacaacaatgcagaagtgtgcccatacccaaatttctgtaggcacgagaatg
tcatgctaccatgatgaagttaagatcagtctgcctgctctattgacaccccaacaccat
cttctgttcacatttttccatgtagatctccaaatgaaacttgaagcccctaaaccagtg
gttgtcggatacgctgcacttccactatcgacacacattcatttgcataccatatacttc
tacttttggggaaataccttctcttccatgttactttcagacgtatctttgccaatttta
cgagagcttgttccacattacctgcaggaaagtggaaaggagagaatggacgaggaagga
aaaaccgttttcaggctgcggttaagactttgctcttctctgtttccagttaatgaaagg
atacgagactttttcgttgagtatgaccgtcacacactgcatacaagtccaccttggggt
tctgagcttctggaggccataaatagtctaaagaatgttgaatctactgcattgttacaa
tttcttcaaccaatactcaatatgctgttgcatcttatcggcgatggtggtgaaaccctt
caggttgctgcatttcgagctatggttaatattctaacccgggtgcaacaggaatcttct
gatggagctgagagaaataggtttcttgttaattatgttgattttgctttcgatgacttc
ggtgaccggcagacacctgtataccctggtttatctactgtttggggtagcctagctcgc
agtaaggctaaaggttatagagttggacctgtctatgatgatgtgttggcaatggcttgg
ttttttctggagcttattgtaaaatcaatgggattggagcaaagtcgtctcttctaccac
aatcttccactaggtgaagatgtcccaccgctacagttgaaagaaggagtcttcagatgt
atcatgcagctatttgattgccttctaactgaggttcatgaacgctgtaaaaaaggttta
aacttggcgaagcgcttgaacagcactcttgctttcttctgttacgatcttttatcaatc
attgagccacgccaagtttttgagctggtatcattatatatggacaagttcgcaggggtt
tgccagtcagtccttcatgattgcaaattgacattcctgcaaataatatgtgatcacgat
ctttttgttgagatgcctggtcgagatccttctgataggaattatctctcgtccgttctt
attcaagagatctttctcacccttgaccatgatgatttgtcacagcgagcgaaagcggct
cgcattttggttgtcctaatatgcaagcatgaatttgacgcaagatatcaaaaaaatgaa
gacagactttacattgctcagctgtattttcctcttataggacagatcctggatgaaatg
cctgtgttctataacctaaatgccattgaaaagcgtgaagtgctagtggtcattttgcaa
atcataagaaacttagacgacgcaactcttataaaagcatggcagcagagcattgctaga
actagattgttcttcaagctgcttgaagaatgtataacccattttgagcataacagaacg
ggagacagcttgctcctaggctctagttctcggagccctgatgctgagcgccctgcttcc
cccaagtattctgatcggttatccccatcagtcaacgcctatttgtcggaggcttcacgc
catgaaataaggcctcaggggacaccggaaaatggatacatgtggaacaggattagtcct
caactaagttccccaaatcaaccctattcattgagggaagcacttgcccaagcacaatct
tcaagaatcggatcaacggccagggcattgagagagactctacatccgatgctgagacaa
aagttggaactctgggaagaaaaccttagcactgctgtgagccttgaagtcttgggaaca
gttgacaagttttcggttgctgcggcttcccgtagcatctcgactgactacgcaaagcta
gattgcataacatctatcttgatgggccttttatctaggagccagcccttaaccttttgg
aaagcttttcttcctgtggtctataatatattcagtctacatggtgcaacactaatggca
agggagaatgaccgcttcttgaagcagattgcttttcatcttttgcggctcgccgtattc
cgaaacgattctgttagaaaaagggctgttgttggtttgcagatccttgtcaggaactcg
ttcaactatttcaagagcaccacgaggctgagggtcatgctgactattactttgtcggag
ttgctgtccgacgtgcaagtaactcagatgaaatctgatggatctcttgaagaaagtggc
gaagctcggcgtcttaggaaatcgttggaggaaatggctgacgtgaggagtaaggatcag
ttgaacgattgtggcctccctgttactgcactagaagtggctgctgaaggttccacggac
aataattggtcttgggtagaggttaaacatctatccaagtgtctagtccaggcccttgat
gccggccttgaacatgcccttttgggttccgcaatgactgtggacaggtgtgcagctgct
gagggtttctataagctagcattggcctatgcgcctgttccggatctccacattatgtgg
ttactgcacctatgtgatgcacaccaggagatgcaatcatgggctgaagccgcgcagtgt
gcagttgctgtggctggtgtgatcatgcaggcacttgttggaaggaatgatgctgtgtgg
agcaaggatcatgttgcttccctctgtaggatttgccctattgtgggcactgatatcggc
gcagaagtagccgcagcggaagtcgagggatatggtgcgtccaagctcaccgtagattca
gccgtcaagtatcttcaactcgcgaacaagctctttgcacaagctgagctataccacttt
tgcgctagcatccaggagctcattattccagtttacaaaagcagaaggtcgtatgggcag
ctggctaaatgccacacgtcgctcacgagcatctacgagtcgattcttgaacaggaggcg
agccctatcccattcagcgatgccacgtactacagagttggattctatggggaactgttt
ggcaagctcaacaaaaaggagtatgtgttcagggagccacgggatgtccgtctgggtgac
atcatggagaagcttagccatacctacgaggttaagatggacggcggtcacaccttacac
atcattcctgactcgaggcaagtcaatgctgaggagctgcaacccggcgtatgctatctg
cagataactgctgtcgatcctgtgatggaggacgaggacctggagagcaggagggaaagg
atcttctccttgtctaccggtactgtccgtgcgcgtgtgtttgaccgtttcctctttgac
acgccgttcacgaagaacgggaagacacaaggcggcctggaggatcagtggaagaggcgc
acggttctccagacggagggttcctttcctgctctggtgaaccgtctcatagtgataaag
tctgagtccctagagttttcgcctgtcgagaatgcgatcggaatgatcgagacaaggacg
ggcgcgttgagaaacgagctggaggaaccacggagctctgaaggcgatcaactgccaagg
cttcagagcctgcagaggatactccaaggaagtgtagctgttcaggtaaacagtggtgta
ttgagcgtgtgcaccgcgttcctatctggtgagcccgcgaccaggctccggtcgcaagag
ctgcagcaactcatagctgcgctgctggagttcatggctgtctgcaagcgcgcgatccgc
gtacattttagattgataggggaggaagaccaggagttccatactcaactcgtcaacggg
ttccagtccctcactgcggagctctctcattacatccctgccatactttcggagttatga
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integrated database retrieval system
