Lolium rigidum (rigid ryegrass): 124702372
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Entry
124702372 CDS
T09103
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124702372
Membrane trafficking [BR:
lrd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124702372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DOCK-C2
DHR-2_Lobe_A
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
124702372
NCBI-ProteinID:
XP_047090467
LinkDB
All DBs
Position
3:136663220..136676942
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AA seq
1837 aa
AA seq
DB search
MDSTAAGEGQRFKRIPRQSCARNLELDPLLNDNLEQWPHLNELVQCYKADFVKDDCKYGH
YESVAPPSFQNQIFEGPDTDMETELQLCNARHSKPEETTEDDMPSTSGRQTYETQLSASS
SKIHCTISPLPAYEPAFDWDNERSLIFGQRVPESLPATHSSGLKITVKVLSLSFQAGLVE
PFSGTVCLYNRDRREKLSEDFYFNILPTEMQDAHISLDRRGVFSLDAPSPSICLLIQLEK
AATDEGGVTPSVYSRKEPVHLTEKEKQKLQVWSRIMPYREPFAWAMIPLFENNHSAGAGD
TASPSSPLAPSMPGSSSQDSIVEPISKFTLDGKINNYSSGTSVIIEIPNLNKVKESYIED
SLQDPKRKVHKPVKGVLRLEVEKLHNDRNDVDTISEGGSMNSELHDAGELNNGRHSRNSV
DGIHSSLNSSTIVKKDTRPNGQNLQAENGDNFQAFDFRMLARSEPFSQLFHCLYVYPLTV
SLSRKRNLFVRVELRNDDSDMSKLPVEAVHPRDHNAELQKCAHTQISVGTRMSCYHDEVK
ISLPALLTPQHHLLFTFFHVDLQMKLEAPKPVIVGYAALPLSTHIQLLSDISLPILRELV
PHYLQESGKERMNYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSPPWGSE
LLEAINSLKNVEYTALLHFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDG
AERNRFLVNYVDFAFDDFGDRQTHVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFF
LELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKEGVFRCIMQLFDCLLTEVHERCKKGLNL
AKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQIICDHDLF
VEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARYQKSEDK
LYIAQLYFPLIGQILDEMPVFYNLNVIEKREVLVVILQIIRNLDDTTLVKAWQQSIARTR
LFFKLLEECITHFEHNRAGDSLLVGSSSRSSDAERPASPKYSDRLSPSVNTYLSEASRHE
IRPQGTPENGFMWNRISPELGSPNQPYSLREALAQAQSSRIGATTRALRESLHPILRQKL
ELWEENLSSAVSLEVLGIIEKFSVAAASRSISTDYAKLDCVTSILMGLLSRSQPLTFWKA
FLPVLYNIFSLHGATLMSRENDRFLKQIAFHLLRLAVFRNDSVRKRAVLGLQILVRNSFN
YFKSTTRLRVMLTITLSELLSDVQVTQMKSDGSLEESGEARRLRKSLEEMADVRSKDQLI
DCGLPITALEVAAEGSTDNRWSWVEVKHLSKCLVQALDAGLEHALLGSVMTVDRCAAAEG
FYKLALAYAPVPDLHIMWLLHLCDAHQEMQSCAEAAQCAVAVAGVIMQALVGRNDAVWNK
EHVASLCRICPVVGTDVGTEVAAAEVEGYGASKLTVDSAVKYLQLANKLFAQAELYHFCA
SIQELIIPVYKSRRSYGQLAKCHTSLANIYESILEQEASPIPFVDATYYRVGFYGERFGK
LNKKEYVFREPRDVRLGDIMVKLNRTYEAKMDGNQTLHIIPDSRQVNADELQPGVCYLQI
TAVDPVMEDEDLESRRERILSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTV
LQTEGSFPALVNRLVVIKSESLEFSPVENAIGMIETRTSALRNELEEPRSSEGDQLPRLQ
SLQRILQGSVAVQVNSGLLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVH
FRLIGEEDEEFHTQLVDGFQSLTAELSHYIPAILSEL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggattctacggcggccggggaggggcagcggttcaagcggattccgaggcagtcgtgc
gcgcggaacctggagctggatccactgctcaatgataatctggagcagtggccacatcta
aacgagctggtgcagtgttataaggctgattttgtgaaagatgactgcaaatatggacac
tacgagagtgttgcaccgccgtcctttcagaatcaaatttttgagggacctgataccgac
atggaaacagaattgcagctttgcaacgctaggcattccaagccagaggaaactactgaa
gatgatatgccgagcacctcagggaggcaaacatatgagactcaactatctgcttcatct
tcaaaaatacattgtactatctcacctttaccggcatatgaaccggcatttgattgggac
aatgagagatctttgatattcggccaacgcgtaccagaaagtctccctgcaacacacagc
agtggattgaagataactgtcaaggtattatctttgtcgttccaagctggattagttgaa
ccttttagcggtacagtctgcttgtacaacagagataggagagaaaagctatcagaagac
ttctactttaacatacttccaacagaaatgcaagatgctcatatttctttggaccgtcgg
ggtgttttttcactggatgccccttctccatcaatctgccttctgatccagctagaaaag
gctgctactgatgaagggggagtaactccttcagtttattcccgcaaagaacctgtgcac
ttgactgagaaagagaagcagaagctgcaagtttggtctcgaatcatgccatatagagag
ccatttgcatgggcaatgattcctctattcgaaaacaaccattctgctggtgctggtgat
actgcctctcctagcagccctttagcaccaagtatgccaggctcaagctcccaagatagc
attgtggagcctatttccaaattcacgttagatggaaaaatcaacaattattcaagtgga
acttcagttatcatagagataccgaacttaaacaaagtgaaggaaagctacatagaggac
tccctccaagatccgaaacggaaagtacacaaaccagtgaaaggtgtactgaggctagaa
gtggaaaaactccataatgaccgcaatgacgtggataccatttctgaaggtgggagcatg
aacagtgaattgcatgatgctggcgagctcaataatggcagacacagcaggaatagcgtt
gatgggatccatagttctctgaattctagtaccattgtcaagaaagatacacgcccaaat
ggtcaaaatttgcaggcagagaatggcgacaattttcaagcgttcgactttcggatgctg
gcccggagtgaaccattttcacaactcttccactgcctctatgtgtacccattgactgtt
agcttgagccgcaaaagaaatctatttgtaagagtagaattgagaaatgatgattctgac
atgagcaaacttccagtagaggctgttcatccaagggatcataatgcagaactacagaag
tgtgcccatacccaaatttctgttggcacaagaatgtcttgctaccatgatgaagtcaag
atcagtctgcctgctctattaacgccccaacatcatcttctgttcacatttttccatgta
gatctccaaatgaaacttgaagcccctaaaccagtgattgtgggatacgctgcacttcca
ttgtcaacacacattcagttactttcggacatatctttgccaattttgcgagagcttgtt
ccgcattacctgcaggaaagtggaaaggaaagaatgaactacctagaggacggaaaaact
gttttcaggctgaggttaagactttgctcttcgttgtttccagttaatgaaaggataaga
gactttttcgtcgagtatgaccgtcacacactacatacaagtccaccttggggttctgag
cttcttgaggccataaatagtttaaagaatgttgaatatacggcattgctgcactttctt
caaccaatactcaatatgctgctgcatcttattggcgatggtggtgaaaccctgcaggtt
gctgcatttcgtgccatggttaatattctaacccgggtgcaacaggaatcatctgatggg
gctgagagaaataggtttcttgttaattatgttgattttgctttcgatgacttcggcgat
cggcagacacatgtgtaccctgggctatctactgtttggggtagcctagctcggagtaag
gctaaaggttatagagttggacctgtctatgatgatgtattggcaatggcatggtttttt
ctggagcttattgtaaaatcaatgggactggaacaaagtcgtcttttctaccacaatctt
ccactgggtgaagatgtcccaccactacagttgaaagaaggagtcttcagatgtataatg
cagctatttgattgccttctaactgaggttcatgaacgttgtaaaaagggcttaaacttg
gcaaagcgcttgaacagcactcttgctttcttctgttacgatcttttatcaatcattgag
ccacgccaagtttttgagttggtttcgttgtatatggacaagtttgcaggggtttgccag
tcagtcctccatgattgcaagttgacattcctgcaaataatatgtgatcatgatctgttt
gttgagatgcctggtcgggatccgtctgataggaattatctctcatctgtccttattcaa
gagatctttctcacccttgatcatgatgatttatcacagcgagcgaaagcggctcgtatt
ttggttgtcctaatatgcaagcatgaatttgacgcacgatatcaaaaaagcgaagacaag
ttgtacattgctcagctgtattttcctcttataggacagattctggatgagatgcctgtg
ttctataatctaaatgtcattgaaaagcgtgaagtgctagtagtcattttgcaaatcata
agaaacttggacgacacgactcttgtaaaagcatggcaacagagcattgctagaacccga
ttgttcttcaagctattggaagaatgtataacccattttgagcataacagagcgggagac
agcttgctagtaggctctagttctcggagctctgatgctgagcgccctgcgtcccccaag
tattctgaccggctatccccatcagtcaatacatatttgtcggaggcttcacgccatgaa
ataaggcctcagggaacaccagaaaatggattcatgtggaacaggattagtcctgagcta
ggttccccaaatcaaccatattcattgagagaagcccttgcccaagcacaatcttcaaga
attggagcaacaaccagggcactgagagagtctctgcatccaatactgagacaaaagttg
gaactctgggaagaaaatcttagtagcgctgtgagtcttgaagtgttgggaataattgag
aagttttcggttgcggcagcttctcgcagcatctcgactgactatgctaagctagattgt
gtaacatctatcttaatgggtcttctatctaggagccagcccttaactttttggaaagct
ttccttcctgtgctctataatatatttagtctacatggtgcaacactaatgtcaagggag
aatgaccgcttcttgaagcaaattgcgtttcatctattgcgactggctgtattccgaaat
gattctgtcagaaaaagggctgttcttgggttgcagatccttgttaggaactcattcaac
tatttcaagagcaccacaaggctgagggtcatgctgactattactttgtcagaattgctg
tctgatgtgcaagtaactcagatgaaatctgatggatctcttgaagaaagtggtgaagct
cggcgtcttaggaaatcattagaggaaatggctgatgtaaggagtaaggatcagttgatc
gattgtggccttcctattaccgcactggaagtggctgctgaaggttccacagacaatagg
tggtcttgggtagaggtcaagcatctttcaaaatgtctagtccaagcccttgatgctggc
cttgaacatgcccttttggggtccgtaatgactgtggacaggtgtgcagctgctgagggc
ttctacaagttagcattggcctatgcgcctgttccggaccttcacattatgtggttactg
cacctatgtgatgcgcaccaggagatgcaatcatgcgctgaagctgcgcaatgtgcagtt
gctgtagctggtgtgatcatgcaggcccttgttggaaggaacgatgctgtgtggaacaag
gagcatgttgcttctctctgtaggatttgtcctgttgtgggcactgatgtgggcacagaa
gtagctgcagcagaagtcgagggatatggtgcatccaagcttacagtggattcagctgtc
aagtatcttcaacttgcgaacaaactcttcgcgcaagctgaactataccacttttgtgct
agcattcaggaactcatcattccggtgtataaaagcagaagatcttatgggcagttggct
aaatgccacacgtcacttgcgaacatctacgagtcaattcttgaacaggaggctagccct
atcccattcgttgatgctacttactacagagttggattttatggcgaaagatttggcaaa
ctcaacaaaaaggagtatgtgtttagggagccacgggatgttcggcttggtgacattatg
gtgaagcttaatcgtacctatgaggctaagatggatggcaatcaaaccttacatatcatt
cctgactcgagacaagttaatgctgatgagctgcaacctggtgtatgctatctacagata
actgctgttgatcctgtaatggaggacgaggacttggagagcaggagagaaaggattctc
tctttatctactggtactgttcgtgcccgtgtgtttgaccgtttccttttcgatacaccg
ttcacaaagaatggaaaaacacaaggtggcctagaagatcaatggaagaggcgcacagtg
ctccagacagagggttcctttcctgctttggtaaatcgtctggtagtgataaagtccgaa
tctctagagttttcgcctgtcgaaaatgcgattggaatgattgaaacaaggacatctgcg
ttgagaaatgagctagaagaaccgcggagttctgaaggtgatcaattaccaagacttcaa
agcctgcaaaggatactccaaggaagtgtggctgttcaggttaatagtggtctattaagt
gtgtgcaccgcattcttatctggcgagcctgcaaccaggctcagatctcaagagctgcaa
cagctcatagccgcattgcttgagttcatggctgtctgcaagcgcgcaatccgtgtgcat
tttaggttgataggggaagaagacgaggagttccacacgcaacttgtcgatgggtttcag
tctcttactgctgagctttctcactatattcctgctatcctttcagagctctga
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integrated database retrieval system
