Lolium rigidum (rigid ryegrass): 124702417
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Entry
124702417 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124702417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702417
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124702417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124702417
NCBI-ProteinID:
XP_047090516
LinkDB
All DBs
Position
3:141883651..141887940
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AA seq
292 aa
AA seq
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MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRPSFGGGGGFGGGGGGGGGRRGVSRHTD
YRVLVSGLPSSASWQDLKDHMRRAGDVCFAEVYREGGGTIGIVDYTNYDDMKYAIKKLDD
TEFKNAFSKGYIRVKEYDGKQARSYSRSRSPSRSRSRSASKSPRGRSASRSRSRSVSSRS
RSASKGRSPSRSPARSKSPIASPANGAVVASPKKRTPSKSPSRSRSPDAKSE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgttggagcaggacgatctatgttggcaacctccccggcgacatccgggag
agggaggtggaggacctcttctacaagtacggccgtattgttgatattgacttgaaggtt
cctccaaggccgcccggctatgcttttgtggagtttgaagatcctcgtgacgctgaagat
gcttgtgctggacgggatggctacaactttgatggaaaccgtctaagagtggagcctgct
catggtggaagaggtagtggtggcccctctcatgaccgtccaagctttggcggtggtggt
ggttttggtggcggtggtggcggtggcggtggacgccgtggtgtgtccaggcacacggat
taccgtgttttggtctctggcctgccttcttctgcgtcctggcaagatttaaaggatcat
atgcgaagagctggtgatgtttgtttcgcggaagtgtatcgtgaaggcggcggcacaata
gggattgttgactacacaaactatgatgatatgaaatatgctataaagaaactggatgac
actgaatttaagaatgccttttctaaaggttatataagggtgaaggaatatgatggcaaa
caagcgcgctcctactcgcgcagccgaagcccaagtcgcagccgcagcaggagtgcaagc
aaatctcccaggggccgctcagcatctaggtccagatcaaggtctgtttcttcccgttct
cggtcggcatctaaaggacgttccccatcaagatcaccagcaagatccaaatccccgatc
gcttctccggcaaatggtgcagtggtggcaagtcccaagaaacgcactccaagcaagagc
ccatctcgctcacggtctcctgatgcgaaatctgaatag
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