Lolium rigidum (rigid ryegrass): 124702494
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Entry
124702494 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124702494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124702494
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124702494
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
HECT type E3
124702494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
124702494
NCBI-ProteinID:
XP_047090592
LinkDB
All DBs
Position
3:complement(149910944..149920465)
Genome browser
AA seq
1837 aa
AA seq
DB search
METRSRKRAAASSSSASKRARPTPTAAPRTRRSAPASAIPMDPSPSSRRRARAAAAAADK
GKDPTDPTSTSAPHHHDVSDDDSDALPAPFPPSFTSASTALQGLLRRLGAGLDDLLPGSA
AAAAAASSSGTSAQLKRILAGLQDSSNSSLQLSCLMQLCEMLSIGTEDSLATFPVDAFVP
LLVGLLGRPDHDDDDDAGASPDVMLLAARALANLVDVLPSACSSVVHYGAIPCFCARLLT
IEYMDLAEQSLQALRKISLEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKL
PSDASDFVMEAVPLLTNLLHHHDSKVLEHASVCLTRIAEAFAHYPHKLDELCNHGLVAQA
ATLVSISNSAGQTSLSTSTYTGLIRLLSTCASGSLLAAKTLLLLGISGTIKDILSGSGLV
AGTSVAPALSRPADQMFEIVSLADDLLPHLPVGIITLPTHCRVFAKGSSTRKPATAKHDG
AGSTENERSGHESLLREHPELLQQFGMDLLPVMTQVYGSSVNAPIRHKCLSIIGKLMCYS
SAEMIQALLGTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHA
VEALICPESANTVPPQVPSQDKDGDSVMSSRPRRQRRRGVAAATESSLLDASNAASTSPC
SAEAPVTSLRFEVSDRAKAFKEKYFPSDHGSSDAGVTDDLLKLRALCAKLNSATENVVTK
AKGKSKASSASYFDISHDAEEQLDLIVTEMLSELSKANGVSTFEFVRSGVVAAFLNYLSC
GTFGKERVSEANLPKLRQQALRRYKLFISVALSVDHGRSETPLALLVQKLQSALCSLERF
PVVLSQSSRIGTGGSRLTSGLGALAQPFKLRLCRAQGEKSLRDYSSNIVLIDPFASLAAV
EEFLWPRVQRSEAASKPIVVCANNSESGAPGATDGASTPASAQSVRRPTTRSKSSAACSG
TSNKETLEESTSAAKGKGKAVVKPSSAEPKGPNTRNSTRRKAASEKDLDMKQTHGDSSSE
DEELDTSHIELDDALMIDDDDDISEDEDDDHEVLQEGSLPICVEDGVHDVKLGDADVSNV
GSASDSQAQLSSGSSARNIISRGANAAEFRSASAFGSQGAMSFVAATMAGLTSAGGRGVR
GSRDRRGLSLGGSINERNKLVFMAGGKQLSKNLTVYQAIQRQLMLDEDDEERFNGSDLPN
DGNRFWGDVFTITYQKADGQPEKGPQGGSTSLHAKSESYRSTSEAHKLSLLDSILQGELP
CDLEKTNSTYNILALLRVLEGLNQLSPRLRALAASDEFAEGKIATLDELYETGTKVPSEE
FVNSKLTPKLARQMQDVLALCSGSLPSWCYQMAKACPFLFPFETRRQYFHSTAFGLSRAL
NRLQQQQGDNQNSGSEREVRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYFG
EVGTGLGPTLEFYTLLGHELQSARLGLWRSSSPSDSEMEIDRNGVIHLDSSDDDFPAKEL
SSDEGRQLIQAPLGLFPRPWPSNVDVSEGSRLFKVIEYFRLVGRVVAKVLQDGRLLDLPL
STAFYKLALGQELDLFDIISFDAELGKTLQELQVLVERKRFLESTSGKNQLEAEDLRFRG
ARIEDLCLDFTLPGYPDYVLKEGEQNTIVNIHNLEEYVDLVVNATVKSGIMKQVEAFRSG
FSQVFDISSLQIFSPQELDYLICGRQEIWEPESLVDNIKFDHGYTAKSPAILNLLEIMAE
FTPDQQHAFCQFVTGASRLPTGGLAALSPKLTIVRKHPSSGVSTTNTTGITDAADDDLPS
VMTCANYLKLPPYSTKEVMHKKLLYAILEGRGSFDLS
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacgcagccgcaagcgcgccgccgcctcctcctcgtcggcctccaagcgcgcg
cgcccgacccctaccgccgctccccgcacccgccgttcagccccagcgtcagcgataccc
atggacccgtccccgtcctcccgccgccgcgcccgcgccgccgccgccgccgccgacaag
ggaaaggacccgacggacccgacctccacctccgccccgcaccaccacgacgtctccgac
gacgactccgacgccctcccggcccccttcccgccctccttcacctccgccagcacggcc
ctccagggcctgctccgccgccttggcgcgggcctcgacgacctcctgcccggctccgcc
gccgccgccgccgccgcctcctcctccggcacctccgcccagctcaagaggatcctcgcc
ggcctgcaggactcctccaactcctcgctccagctctcctgcctcatgcagctctgcgag
atgctctccatcggaaccgaggactccctcgccaccttccccgtcgacgcattcgtgccg
ctcctcgtcggcctgctggggcgccccgaccacgacgacgacgacgacgcaggggccagc
cccgatgtcatgctgctggcagcgcgagcgctggcaaacctagtggatgtcctaccgtcg
gcgtgctcatccgtagtgcactatggggccataccctgcttctgcgcacgactgctcacc
atcgagtacatggacctagctgagcagtctctgcaagctcttaggaagatctccctggag
catcctactgcctgtttgagagctggtgcactaatggctgtcctctcctatcttgatttc
ttctcaactggtgttcagagggtagcattgtctactgctgctaatatctgcaggaagctg
ccatccgatgcgtccgactttgtcatggaagccgtgccgttgctcactaatctcctacac
caccacgactctaaggtactagagcatgcttctgtttgtttaacacgcattgccgaggct
tttgctcactatccacacaaactggatgagttgtgcaatcatgggctggtcgctcaagca
gctactttggtttccatcagcaactccgcaggccagacatccttgagtacatccacatat
acgggtttaatccgtcttctctcaacatgtgcaagtgggtcgttgttggcagccaaaaca
ctccttctgcttggtattagtggcactattaaagatattctttcagggtctggtttggtt
gctggaacatctgttgccccagctttgtcaaggcctgctgatcagatgtttgagatcgtg
agccttgctgatgatttactcccgcatttgcctgtggggataattactttgccaacacat
tgccgtgtatttgctaaaggctcttctacaaggaaacctgccacagccaaacatgatggg
gctggttcaacagaaaatgaaaggtcaggtcatgagagtctattgcgtgagcaccctgaa
cttctacaacagtttggtatggacttattgcccgtaatgacacaggtgtatggttcaagc
gtaaatgcaccaatacgtcataagtgcttatctatcattgggaaattaatgtgctatagc
tccgctgaaatgatccaggcgctccttggcacgacaaacatatccagcttcctagcaggc
attcttgcttggaaagatccacaggtgctgatccctgctcttcagatagcagaaattatg
atggagaaactcccggagacattctccaagttatttgtgagggaaggtgttgttcatgct
gtggaggcacttatatgtccggaatccgcaaatacagtgcctcctcaagtaccatcacaa
gataaggatggcgattctgttatgtcgtcacgccctagacgacaacgccgacgtggggtt
gctgcagcaacagaaagcagtttgttagatgcatcaaacgctgctagtacctcaccatgc
tcggcagaagctccagtcacgagtctccgttttgaagtaagcgaccgtgcgaaggcattc
aaagaaaaatacttcccttctgaccatggttccagcgatgctggagtcaccgacgacctt
cttaaactaagagcactctgcgcaaagttgaattctgcaactgaaaatgtcgtaacgaaa
gcaaaagggaaatcgaaggcctcgagtgctagttattttgacatttcgcatgatgcggag
gaacaactagacctgatagtaactgaaatgctctccgagctgagcaaagctaatggtgtt
tccacatttgagttcgtcaggagcggagttgtggctgcgtttctcaactatctgtcatgc
gggacatttgggaaagaaagggtgtctgaagctaacctaccaaagcttcgccagcaggcg
cttaggcgatacaagttgttcatatccgttgccctttctgttgaccatggaaggagtgaa
actccgttggcacttttggtccaaaaactgcaaagcgctttgtgttcattggaacgtttc
cctgttgtcctcagccagtctagcagaattggtactggaggctctcgtctaacctcaggt
cttggtgctctggctcaacccttcaagttgcgcctgtgtcgagctcaaggcgaaaaatca
ctccgagattattcatcaaatattgtacttattgatccctttgcaagtctagcagctgtt
gaagaattcctttggccgagagttcagcgcagtgaggctgcttcgaaacctatagttgtt
tgtgcaaataattctgaatctggtgcacctggagctactgatggtgcatcaacacctgca
tcagctcagtctgtccggcgtccaacgacaagatcaaagtcatctgctgcatgtagtggt
acatctaataaagagactctggaggaaagcactagtgctgctaaaggaaaaggcaaagct
gttgtcaaaccgagctcagctgaaccgaagggacccaacacaaggaattctacccgcaga
aaagctgcttcagagaaagatttggacatgaagcaaacacatggtgacagtagttctgag
gatgaggagctggacacatctcatattgagcttgacgatgctttaatgattgacgatgat
gatgacatttccgaggatgaagatgatgatcatgaggttctccaagagggttctcttcct
atttgcgttgaagatggggtgcatgatgtgaaactgggtgacgctgatgtctctaatgtt
ggttctgcaagtgatagccaggcacagctgtcatccggttccagtgctcgaaacattatc
agtaggggagcaaatgccgctgaatttcgaagtgcaagtgcctttggatctcaaggtgcg
atgtcatttgttgctgcgacaatggctgggcttacttctgctggtggtcgtggtgttaga
ggtagtcgtgatcggcgtggcttgtcacttggaggtagcataaatgagcgcaacaaactg
gtattcatggctggtgggaagcagcttagcaaaaatttgactgtatatcaagccatccag
cgtcaactgatgcttgatgaggacgatgaagaaaggtttaatggatccgacttaccgaat
gatgggaaccgcttctggggtgacgtgtttacaatcacttaccagaaggctgatggccaa
cctgagaaggggccccagggtggttccacctcattgcacgcaaaatcagaatcttacaga
tctacttctgaagcacacaagctttcccttctcgatagcatcttacaaggagaacttcca
tgtgatttggagaaaacaaactcaacttacaacattctagcactcttacgtgtactagag
gggctgaatcagttatcccctcgtttaagagcgctggcagcatccgatgagtttgccgag
gggaagattgctaccctggatgagctatatgaaactggaaccaaggtaccctcggaagag
tttgtcaatagcaagctgacgccgaagcttgctcggcagatgcaggatgtccttgcactc
tgcagcggcagtttaccttcttggtgttatcagatggcgaaagcctgtcccttcctgttt
ccttttgaaacgaggaggcagtatttccactccacagcttttggcttgtcccgggcgttg
aatcggcttcagcaacaacagggtgataaccagaactctggtagcgaaagagaggtccgg
tttggcaggttgcaacgccagaaagtccgtgtttcccgtaaccgtattctggattctgct
gcaaaagttatggagatgttctcaagtcagagagcggttcttgaggtggagtactttggt
gaggttgggacaggactgggtcctactttggagttttacacactcttgggccatgaacta
caaagtgctcggttgggattatggagatcaagttcaccttccgattcagaaatggaaatc
gatagaaacggtgtgatccatctggattcttctgatgatgattttcctgcaaaagaactc
agctctgatgaaggcaggcaactgatacaagctcctcttggattatttcctcgaccttgg
ccatctaatgttgatgtctcagagggtagcagattattcaaagtcatcgagtatttccgc
ttggttggtcgagttgtggcaaaagtcttgcaagatggaaggcttttggatttgccttta
tccacagctttttataagctcgcacttggacaagagcttgatttgtttgacatcatctcg
tttgatgccgagcttggaaagacactgcaagaactgcaagttcttgttgagcgtaagagg
ttccttgaatccacgtctggcaagaatcagctggaagctgaagacttgcgtttccgtgga
gctcgtatcgaagacctgtgtttagattttacccttccaggctatcctgattatgttctt
aaagaaggcgagcaaaacacaattgttaatatccacaacctggaagagtatgttgattta
gtagttaatgcaacggtgaagtcagggataatgaagcaggtagaagctttcagatcagga
tttagccaggtctttgatatatcatccctccaaatattttcacctcaagagcttgactat
ctaatatgcggtcgtcaagaaatttgggagccggaatcactggtggataacataaagttt
gatcatgggtatactgctaaaagtcctgcaatcttaaatctacttgagatcatggcggaa
tttacccctgatcagcagcatgcgttctgccagtttgtaactggtgcttctcggcttcca
actggtggcttagctgcccttagtcccaagcttactatagttcgaaagcacccctcgagt
ggcgtcagtaccacaaatacaaccgggatcacagatgctgcagatgatgatttgcccagt
gtcatgacgtgtgccaattatcttaaactacccccgtattccacaaaagaagttatgcac
aagaagctgctctacgccatcctagaaggccgcggatcttttgatctatcgtga
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integrated database retrieval system
