Lolium rigidum (rigid ryegrass): 124702530
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Entry
124702530 CDS
T09103
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702530
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124702530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
124702530
NCBI-ProteinID:
XP_047090630
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All DBs
Position
3:154376629..154382142
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AA seq
490 aa
AA seq
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MSSSGGGGQQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGRIVNTKSGVGANRNQAF
VEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVTIEG
VQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDSPTASAAREALDGRSIPRY
LLPDHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGPDGRRV
EAEGNVLLASIENMQYAVSVDVLHTVFSAFGVVQKIAIFEKNGGTQALIQYPDVSTATVA
KEALEGHCIYDGGYCKIHLSYSRHTDLNVKAHSDKSRDYTIPEGAQQAAPQSAGLPPTSA
GWQGNPQAGGPYGPPGVPAQNHNTNGQMPNWNPGNSGYPPAPGNSGYPPAPGNSGYPPAP
GQYPGQMYSAPPQYAPSGGFSAPPPPPPHEMHSSQQREMHPSQQMPPAHHGNQQGPAGAP
GTGQPPYYHN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatccggcggcggcgggcagcagttccggtacacgcagacgccgtccaaggtg
ctgcacctgcggaacctgccgtgggagtgcacggaggaggagctcgtcgagctctgcaag
cccttcggccgcatcgtcaacaccaagtccggcgtcggcgccaaccgcaaccaggccttc
gtcgagttcaccgatgttaatcaagccatttcaatggtttcttattttgcatcatcttcg
gaaccagcgcaaattcgaggaaaaactgtgtacattcagtattcaaataggcaagaaata
gttaacaacaagagccctggagagactgctggaaatgtgttgcttgttaccatagagggt
gttcaagctaatgatgtcaccattgatgtgatccatttggttttctctgcttttggtttt
gttcacaaaatagccacttttgagaaggctgcaggttttcaggcactaatccagtatact
gattcgcccactgcttcagccgcaagagaagccttggatggaagaagtatcccaaggtac
ttgcttccggatcatgtagtatcttgccacttgcggatatctttttctgcacataaggat
ttgaatattaagttccaatcacaccgcagcagagattataccaacccctaccttccagtt
aactcctctgccatcgatagtacattgcagcctgctgttggtcccgatgggaggagggtg
gaggctgagggcaatgttcttcttgcgtcaattgagaatatgcaatatgcggtttcagtg
gatgttctccatactgtgttctctgcatttggcgtagtccagaaaattgctattttcgag
aagaatggtggaacacaagctttgattcagtaccctgatgtaagtacggccacagttgcg
aaggaagcattagaagggcattgcatctacgacggtggctactgtaagattcacctgtca
tactctcgtcatactgatctcaatgtaaaggctcacagtgacaagagcagggattacaca
atcccagaaggagcacagcaagcagcaccgcagtcagccggtctaccacctacatcagct
gggtggcaaggtaatcctcaagcaggtggaccatacggaccacctggtgtccctgctcaa
aaccacaacaccaacggacaaatgccaaattggaatccaggcaactcagggtacccacca
gctccagggaattcagggtacccaccagctcctgggaactcagggtacccaccagctcca
ggccagtatcctggccagatgtactccgccccgccacagtatgcgccatcagggggcttc
tcagcccctcctccgccaccacctcatgagatgcactcttcacagcagcgtgagatgcat
ccttcacagcagatgccacctgcgcatcatggaaatcagcaaggaccggcaggtgcccct
ggaactggccaacctccgtattaccacaattaa
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