Lolium rigidum (rigid ryegrass): 124702552
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Entry
124702552 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124702552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702552
Spliceosome [BR:
lrd03041
]
Complex B
Other components
Prp19-related factors
124702552
Complex C
124702552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_12
AAA_11
Aquarius_N_3rd
AAA_19
AAA_30
UvrD_C_2
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
124702552
NCBI-ProteinID:
XP_047090660
LinkDB
All DBs
Position
3:156535599..156545619
Genome browser
AA seq
1579 aa
AA seq
DB search
MPKVYGTGVFEFRHPRAAEYPLPADAPPAAAPASTGGSMTLLDIQRDRLTCVAAEHWGSP
PAAAAAFDADLVKEIYNKELRVVGRGRKTVPLQRVMILEVSQYLENYLWPHFDADHASFE
HIMSMILMVNEKFRENVAAWTCFHTRKDAFKGFLWRVLKLKDEDRTISMAEKTNYLLFMI
NAFQSLEDELVRETILQVVSLKLWHTLSFGRLQMELCLNPELIKKWTKIKRKEAKEAKKA
GQPCNPSEMLENKFLRNLIEEFLEILDSKVILSSQDGGEESVFTESLSGQVDDSSVLYCE
RFMEFLIDMLSQLPTRRFLRPLVADTAVVAKCHLSTLYTHEKGXLFAQLVDLLQFYEGFE
INDHSGTQLSDDDVLQAHYSRFQAFQLLAFKQVPKLRDLALCNIGSIHKRADLTKKLLVL
SDVELQDLVCNKLKIISEEDPCSGRRDFLIEVLVAFFEKRQSQKEAVNALPLYPNEQIMW
DESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLHA
YINNEGDTGFRGWSRMAVPIKEFRITQVKQPNIGEVKPSAVTADVTFSISSYRPQIKSEW
DGLKEHDVLFLLSIRPSFEPLSSEEDAKSTVPERLGLQYVRGCEVIEIRDEEGGLMNDYT
GRIKRDEWKPPKGEIRTVKIALDTAQYHIDATEVAEKHGENVYGTFNILMRRKPKENNFK
AILESIRDLMNETCIVPEWLHNIFLGYGNPSAAQWTNMPDLLETIDFKDTFLDAEHVVQS
FPAFQVTFINTDGTENMHPSPPFRIKLSKKMREISHALPGNVNSSDITSKNNMVDDEGSK
KEKLRVETYIPADPGPYPQDKPKQNSVRFTPTQIGAIISGIQPGLTMVVGPPGTGKTDTA
VQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDFS
RQGRVNAMLVRRLELLGEVAKLARSLHLPEDVSYTCENAAYFWLLHVYARWELFLAACAP
NKENPTFVKDRFPFSEFFSDTPQPIFTGESFEKDMHAAKGCFKHLSTIFQELEECRAFEL
LKSTAERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPT
LLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGVPYIELNAQ
GRARPSIAELYNWRYRELGDLPYVREEAIFHKANSGFSFEYQLVDVPDYRGRGESAPSPW
FYQNEGEAEYIVSVYIYMRLIGYPANKISILTTYNGQKFLIRDVINRRCKPWNIEPPCKV
TTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSLYEQCYELQ
PTFQLLLRRPDKLALNLEECTPFTERPLGEAGNIHYITDVEDIGHLVNFRLEHLRQMQSM
QYFAPHTEAVSNPPETVNGGIVLPNTKEGMEEENGDASAVLNNDKMDEDTAEAKDDMMQE
ASKMDEGNVEAGDVAIEDKMVEESADEAKDKMVEGSADVVIEDKMVEGSADETKDKKEEE
KAAEANDKMEDGNPMSEDL
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtctacggcacgggggtcttcgagttccggcacccgcgcgccgccgagtac
ccgctccccgccgatgcccctccggcggcggcgcccgcctccaccgggggctccatgacg
ctcctcgacatccagcgcgaccgcctcacctgcgtcgccgccgagcactggggctcgccg
cccgccgccgccgccgccttcgacgccgacctcgtcaaggagatctacaacaaggagctc
cgcgtggtgggccgcggccgcaagaccgtcccgctccagcgtgtcatgatcctcgaggtc
agccagtacctcgagaactacctctggccgcacttcgacgcggaccacgcgtccttcgag
cacatcatgtccatgatcctcatggtcaacgagaagtttcgagagaatgtggctgcgtgg
acatgtttccatacccggaaggacgccttcaaaggcttcctgtggcgggttctcaagctc
aaggatgaggataggaccattagtatggcagagaaaacaaattacctcttgttcatgata
aacgcgtttcagagtttggaggatgaacttgtccgggaaactatactccaggtagtaagc
ttaaagttgtggcatactctctcttttggacggcttcagatggaactttgccttaatcct
gaattaattaagaagtggaccaaaatcaaaagaaaagaagcaaaggaagcaaaaaaggca
ggccaaccttgtaatccttcagaaatgcttgagaataagttccttaggaacctaattgaa
gaatttttggagattcttgattcaaaggttatattgtccagtcaagatggtggtgaagaa
tctgtctttaccgagtcacttagtgggcaggttgatgattccagtgtcttgtattgtgaa
agattcatggaatttctgattgatatgttgagccagcttcctacgagaagatttttaagg
cctctagtcgctgataccgctgttgttgctaagtgccacttaagcacactctatactcat
gaaaagggcngcctttttgcacaattggtggacttgctgcagttctatgaaggctttgag
atcaacgatcactctggaacacagcttagtgatgatgatgttttgcaagctcattattcc
cgtttccaagcttttcagctgctagcatttaaacaagtgcctaagttgcgagaccttgcc
ttgtgtaatattggttcaattcataagcgtgctgatttaacaaagaagctgcttgtcttg
tcagatgtggaactgcaagatctggtttgcaataagcttaaaataatttcggaggaggat
ccatgcagtggaaggcgtgatttccttattgaggtccttgttgctttttttgagaagcgc
caatcacagaaagaagcagttaatgcacttcctctttatcctaatgaacagatcatgtgg
gatgagagccttgttcctagcatcaattattctggagaaggctgtcttgccttaccaaaa
ctcaatctccagtttctgacacttcatgattatttgttgaggaatttcaatctctttcgt
cttgaatcaacatatgaaattcgtgaagatattcaggaagctgttcctcatctacatgct
tatatcaataatgagggagacactggctttcgtggatggtccaggatggccgttccaatc
aaggaatttaggatcacacaagtgaagcaacctaacattggtgaagttaagccttctgct
gtaacagctgatgttacttttagcatatcaagctacagaccacagataaaatctgagtgg
gatggtttgaaagagcatgacgtgttatttttgttgtcaatccgcccatcttttgaacct
cttagctctgaggaagatgcaaaatcaactgtgcctgaaaggctaggattgcaatatgta
cgtggatgtgaggtgattgaaattcgtgatgaggaaggaggactcatgaatgactataca
ggaaggataaagagagatgagtggaaacctcccaagggtgagattcgtacagttaaaatt
gccttagatacagcacagtaccacattgatgctactgaggtagcagagaaacatggagaa
aatgtgtatggcacatttaatattctaatgagaaggaaacccaaggagaataactttaaa
gcaatcctggaatctatacgtgatctaatgaatgaaacatgtatagttcctgaatggctg
cataacatattcttgggttatggaaatccttctgccgcgcagtggacaaacatgcccgat
cttctggaaactatcgattttaaggacactttccttgatgctgagcatgtggtgcaaagc
tttccagctttccaggtcacatttatcaatactgatggtaccgaaaacatgcatccaagc
cctcccttcaggattaagttgtccaagaaaatgagggaaattagtcatgccttgcctggc
aatgtaaactcctctgatataacaagcaagaacaatatggtcgatgatgaagggtctaag
aaagaaaaactaagggttgagacttacattcctgctgatccagggccatatcctcaagat
aaacctaaacagaactcagtgaggtttacacccactcagattggtgctataatatctggt
attcaacctggtttgacaatggttgttggtcctcctggtacgggaaagacagatacagct
gtgcagatattaaatgttctgtatcataactgtccttcacaaagaacgctgattattacc
cattccaatcaagctttgaatgacttgttcgagaagataatgcagagggatgtgcccgcg
aggtaccttcttcgtcttggtcagggtgagcaagagttggcaactgatctcgattttagc
cgtcaaggtcgtgtcaatgctatgctggttcggcgactagagctccttggtgaggttgca
aaactggcaagatcccttcatcttcctgaagatgtgagctacacatgtgaaaatgctgca
tatttttggttattacatgtttacgcccgctgggaactattcttagctgcctgtgcgcca
aacaaagagaatcccacttttgttaaagaccgttttccattttccgagttcttttcggat
accccacaacctatatttactggtgagtcattcgagaaagatatgcatgcagccaaaggt
tgtttcaagcatctttccacgatattccaagagctggaagagtgtagggcttttgagtta
ctaaagtcaacagcggagcgagcaaattatctaatgactaaacaagccaagattgttgcc
atgacttgcacccatgcagcattgaagagaagagactttcttcaactgggtttcaaatat
gacaatttgctgatggaagaaagtgcgcagatattggagatagaaacttttataccaacg
ctccttcagcgacaggaagatggccatgctcgtctcaaacgttgcattttaattggtgat
caccatcagttaccgcctgttgtgaagaacatggcttttcagaagtacagccacatggac
cagagtctctttacaaggtttgttcgccttggtgtgccttacattgaactcaatgcccag
ggacgtgccagacctagtattgctgaactttataactggagatacagagaactgggagat
ctgccttatgtacgtgaggaagctatattccataaagctaattctggattctcttttgag
tatcagctggttgatgtccctgattaccgtggcagaggcgagtctgctccttctccttgg
ttctaccagaatgaaggggaggctgagtatattgttagtgtttatatttatatgcgtctg
ataggataccctgccaataagatttcaatattaactacttacaatggtcagaagtttctt
atccgtgatgttatcaacagaagatgcaagccatggaacattgagccaccttgcaaggtt
accacggtggacaaattccagggtcaacaaaatgattttattttattatctctcgtccgg
acccgatttgtgggccatcttcgtgatgtcagaagacttattgtggctatgtctcgtgct
cgtctgggcttgtatgtgttctgtcgccgttccctgtatgaacagtgctatgaattgcag
ccaacattccagcttctactccgaaggccagataagcttgccttgaatcttgaagagtgc
accccgtttacagagcgacctttgggagaagctggaaatattcattatattactgatgtt
gaagatattggacacctagtgaatttcagactggaacatcttcgtcagatgcaatcaatg
caatattttgcacctcatacagaggctgtttcaaaccctcctgaaactgtcaatggtggg
atagttttgcctaatacgaaggagggcatggaggaagaaaatggcgacgcgtctgctgtg
ttaaacaatgacaagatggatgaagatactgctgaggcaaaggatgacatgatgcaggaa
gcaagtaagatggatgaaggtaatgttgaggcaggtgatgtggctatcgaagacaagatg
gtggaagaaagtgctgatgaggctaaggacaagatggtagaaggaagtgctgatgtggtt
atcgaggacaagatggtggaaggaagtgctgatgagaccaaggacaagaaagaggaagaa
aaggctgctgaggctaatgacaagatggaggatggaaatcctatgtcagaggacctgtag
DBGET
integrated database retrieval system
