KEGG   Lolium rigidum (rigid ryegrass): 124702600
Entry
124702600         CDS       T09103                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124702600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124702600
Spliceosome [BR:lrd03041]
 Complex C
  Other components
   Step II factors
    124702600
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_WDR75_2nd DExH14_plug
Other DBs
NCBI-GeneID: 124702600
NCBI-ProteinID: XP_047090718
LinkDB
Position
3:160166983..160170045
AA seq 566 aa
MDLLQSYSPGDASSPEDESLSSPDSSPLRLPTKSAAPAVDETALALSVAASTSRPLDPSV
HLVPFNPTADQLWAPVLGPQHPHAPISSASGHRNHKLGHVEDAALLPFLFDEQYNTFHRF
GYASDPSGLQIIGDAQAANPDTVYNLPPSEHKRRRIQSKEDNQEPVPPEADNPAADEWVV
HNKKSPWAGVREGPPVELTDEQKQYAEAHAAKKAEKEARGEGKEKTEVVAKTTFHGKEEK
DYQGRSWITPPKDAKAANERCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSASMDCKI
KIWDVLESKTCMRTYMGHNKAVRDISFCSDGSKFLSAGYDRNIQYWDTETGQVISTFSTG
KVPYVVKLNPDEDKQNILLAGMSDKKIVQWDMRSGEITQEYDQHLGAVNTITFVDNNRRF
VTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSIAVHPNSNWLAAQSLDNQILIYSTKER
FQLNKKKRFAGHIVAGYACQVSFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLKCHNGVC
IGCEWHPLETSKVATCGWDGVIKYWD
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggatctcctccagtcctactctccaggcgacgcatcgtcgccggaggacgagtcgctc
tcctcgccggactcctccccactccgcctccccaccaagtccgccgcccccgccgtcgac
gagaccgcgctcgcgctgtccgtcgccgcctccacctcccgcccgctcgacccctcggtc
cacctcgtccccttcaaccccaccgccgaccagctctgggcgcccgtcctcgggccccag
cacccgcacgcgcccatctcgtccgcctccggccaccgcaaccacaagctcggccacgtc
gaggacgccgcgctgctccccttcctcttcgacgagcagtacaacaccttccaccgcttc
ggctacgcctccgacccctcgggcctccagatcatcggcgacgcgcaggccgccaacccc
gacaccgtctacaacctgcccccctccgagcacaagcgccgccgcatccagtccaaggag
gacaaccaggagcccgtgcccccggaggccgacaaccccgcagccgacgagtgggtcgtc
cacaacaagaagagcccctgggccggcgttcgggagggcccgcccgtggagctcacggac
gagcagaagcagtacgcggaggcgcatgccgccaagaaggccgagaaggaggcgcgcggc
gaagggaaggagaagacggaggtggtggccaagaccaccttccacgggaaggaggagaag
gactaccagggacgatcgtggatcactccgcccaaggacgccaaggcggccaacgaacgc
tgctatattcccaagaggtgtgtgcacgagtgggttgggcacaccaagggggtctcagcc
atcagatttttcccaaagtatggccatctgctgctgtctgctagtatggattgcaagatt
aaaatctgggatgtgctcgagtccaagacgtgtatgcggacctacatggggcacaacaag
gcggtgagggatatatcgttctgcagcgacggcagcaagttcttgagcgctgggtatgac
aggaatattcagtactgggatacggagactgggcaggtgatatccaccttctctaccggg
aaggtcccttatgtcgtgaagctcaatcctgatgaagataagcagaatattctcctcgct
gggatgagtgacaagaagattgtgcagtgggatatgaggtcaggggagatcacgcaagag
tatgatcagcatttgggggcggtcaacaccatcacttttgtagataataataggaggttt
gtgacctctagcgacgacaagtcgcttcgcgtgtgggagtatggtatccccgtggtgatt
aagtatatcagtgagccacacatgcactccatgccgtctattgctgtacaccccaactca
aactggctggcagcgcagagcttggataaccagattctgatatacagcaccaaggaaagg
tttcaacttaataagaagaagaggtttgcgggccacattgtggcaggttatgcttgtcag
gtgagcttctcacctgatggcaggtttgtcatgtcaggagatggtgaaggtagttgctgg
ttctgggactggaaaagctgcaggagattcaagaccctcaagtgccacaatggagtttgc
attgggtgtgagtggcatccactggagactagcaaggttgcaacctgtggatgggatggc
gtaatcaaatactgggattaa

DBGET integrated database retrieval system