Lolium rigidum (rigid ryegrass): 124702659
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Entry
124702659 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124702659
Membrane trafficking [BR:
lrd04131
]
Protein recycling
Others
EARP complex
124702659
Endosome - Golgi transport
Tethering complex
GARP complex
124702659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
124702659
NCBI-ProteinID:
XP_047090774
LinkDB
All DBs
Position
3:complement(166763031..166771938)
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AA seq
699 aa
AA seq
DB search
MEAVPASVAHDGQKQRFDLGVFVGDLPLDDDVASDNESLDGLEQELQDCKNDEEVANILA
NGIKMRDYTKGVENSIRQVELDSIQDYITESENLVLLHDQICDCDNILSQMETVLTGFQT
EIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVEDIIVPPRMIDIIVDGEVNDEYL
KTVEILSKKIKFIEADSMVKSSKALKDVQPEVERLRQKAVSKIFEFIIQKFYALRKPKTN
IQILQQSVLKYKYTIVFLKEHAKEIYAEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIA
TSTDLLGVETRSTGYLFSIGKEPLKARSSVFALGERINVLKDIDLPALIPHIAEAKSQKY
PYEVLFRSLQKLLIDTATSEYLFSDDFFGDESLFQDIFAGPIQVVDEYFNAILLNCYDAI
GIMLMIRIMHQHQLIMFRRRIPCLDSYLDKVNMSLWPRFKMVFDLHLSSLRNANIRTLWE
DDVHPHYVTRRYAEFTASLVHLNVEYGDGQLDLNLERLRMAIEDLLVKLAKMFPKPKLQT
VFLINNYDLTIAILKEAGTDGGKAQLHFEEVLKSNIAIYVEELLLEHFSDLIKFVKTRTS
EDAASSSDKANIGDVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILKAALTQLLL
YYTRLTECVKRVNGGSSLNKDLVSISSILYEIKKYSRTF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtcccagcctccgtagcgcacgatgggcagaagcagaggtttgacctcggg
gtcttcgtcggcgacctccccctcgacgacgacgtggccagtgataatgagtccctggat
gggctagagcaggagctccaggactgcaagaacgacgaggaagtagcaaacatcctggct
aatggcatcaaaatgcgtgattacacaaaaggtgtcgagaacagcatacgccaagttgag
ctggattctatacaggattacattacagaaagtgagaacctagtattgctgcatgatcag
atttgtgactgtgataatattttgtcccaaatggaaaccgttctaactggattccagaca
gaaattggttctataagttcggagataaaggtacttcaggagaaatctatggacatggga
ttaaagttgaaaaaccgtaaggctgcagagtctaaactgtcaaaatttgttgaggatata
atagtccctccaaggatgattgatataattgttgatggagaggttaatgatgaatacttg
aaaacagttgagattttaagcaaaaaaatcaaattcattgaagctgactccatggttaaa
tcatcaaaggctctaaaagatgttcagcctgaggttgagagacttcggcagaaagcagta
tcgaagatttttgagtttatcatccaaaagttctatgccttgagaaaaccaaaaacaaat
attcagattctacagcagagtgtccttaaatacaaatacacaatagttttccttaaggaa
catgctaaggagatatatgcagaagtccgtgcggcttacattgataccatgaacaaggtg
ctgagcgcacatttccgtgcttatatacaagctttagagaaattgcagttggatatagca
acctcgactgatttacttggagttgaaactagaagtacaggctaccttttctccattgga
aaagaacctctgaaagcccgttcttcagtgtttgctttgggtgaaagaataaatgtatta
aaggatattgatctgcctgcattgatacctcatatagctgaagccaagtcacagaagtat
ccatatgaagttcttttcagaagcttacagaaacttctgattgatacagctacttctgag
taccttttctctgatgatttctttggtgatgaatccctatttcaagatatatttgctgga
ccaattcaagttgtcgatgaatatttcaatgccatacttctgaactgctatgatgcgata
ggaataatgcttatgatccgaataatgcatcagcaccagcttatcatgtttaggcggcga
attccatgtttggactcttacctagacaaggttaatatgtcactttggccacgcttcaag
atggtctttgacttgcatctgagcagcttgcgcaatgctaatattaggactctttgggag
gatgatgtacatccccactatgtcactaggagatatgctgaatttacagcatctcttgtt
catctcaatgttgaatatggggatggtcagcttgatcttaatcttgagcgattacggatg
gctattgaagacttgcttgttaagttggccaagatgttccctaaaccaaagttgcaaaca
gtgttcctgataaacaactatgatttaacgattgccatattgaaggaagctggcactgac
ggtgggaaagcacaacttcactttgaggaggttctcaagagcaacattgcaatttatgtg
gaggaattgcttctggagcatttcagtgatttgatcaagtttgtcaaaacgcgtacatcg
gaagatgctgcctcaagttcagacaaggccaatattggcgatgtggagccattggtgaag
gattttgccagccgatggaaggctgcgatcgagctgatgcacaaagatgtcatcacgtct
ttcagcaacttcctgtgtgggatggagatcttgaaagcggccctcacgcagctgcttttg
tactacaccaggcttaccgagtgcgtgaagagggtcaacggtggctcttccctgaacaag
gacttggtttccatatcctcaatcctgtacgaaatcaagaaatactctaggaccttttag
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