Lolium rigidum (rigid ryegrass): 124702828
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Entry
124702828 CDS
T09103
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
lrd
Lolium rigidum (rigid ryegrass)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
RecG_dom3_C
UPA
Motif
Other DBs
NCBI-GeneID:
124702828
NCBI-ProteinID:
XP_047090961
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Position
3:188014174..188027781
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AA seq
823 aa
AA seq
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MATSIPRAPPPNPHHNHLLHRPPTLTPLLRLRLPFRRPSAAAVTSTATAAVAHDDISQLN
HRLRALVRRRDAAFAASSPIDPAQAEAYLHMIREQQRLGLRQLRRDAADPKEDRDGGSDE
EVEEEGGRRRKGMAAGSSLGHRVDPRELEPGEYVVHKKVGVGKFACISGEDGEDYVFIQY
ADGMAKLAVDQAARMLYRYNLPHEKKKPRNLSKLNDPSTWEKRRLKGKLAVQKMVVNLME
LYLQRMRQRRTPYRKPVAMDQFAAEFPYEPTPDQNQAFVDIENDLTERETPMDRLICGDV
GFGKTEVAMRAIFIVVSAGYQAMVLAPTVILANQHYDVMSERFSNYPDIKVAIFSGAQSK
EEKDGLITQIKNGHLQIIVGTHALLTERMGYNNLGLLVVDEEQKFGVQQKEKIASYKASI
DVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVAVKTYVSAFSRERALSAIKLELKRG
GQVFYVVPRIKAIDDVLQFLKDSLPDVPMAVAHGKKVSKNIQLAMEKFSCGDIKILVCTH
IIESGIDIPNANTMIVQYAELFGLAQLYQLRGRVGRSGREGYTYLFYTDKSLLSRIAMDR
LGAIEEHSDLGQGFHVAEKDMGIRGFGSMFGEQQSGDVANVGIDLFFDMLFDSLSKVDQF
CLNPVPYKDVQLDINISPHLSSEYISYLENPVELLNEAAKAAEKDILTLMQFTEDLRRRY
GKEPRDMELLLKKLYVRRMAADLGISRIYPSGKMIIMKTNMNKKVFRLMAEAMASGTHRN
SLSFTGKEIKAELLVNLPDTLLLNWLFHCLADCYSVMPALVKY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccatccctcgcgctccgccacccaatcctcaccacaaccacctcctccac
cggccaccgaccctaacccccctgctccgcctacgcctgccgtttcgccgcccctccgcg
gccgcggtcacctccacggcgacggccgccgtggcccacgacgacatctcccagctcaac
caccgcctacgcgcgctcgtccgccgtcgcgatgccgctttcgctgcctcgtcccccatt
gaccccgcccaggcggaggcctacctccacatgatccgcgagcagcagcgcctcggcctc
cgccagctccgccgggatgcggctgatccgaaagaggatagagacggcggaagcgacgag
gaggtcgaggaagagggcggcagaaggaggaagggcatggcggccgggagctcgttgggg
caccgggtggatccgcgggagctggagcccggggagtacgtcgtgcacaagaaggttggc
gtcggcaagttcgcctgcataagcggagaggacggcgaggactatgtgttcattcagtat
gctgacggcatggccaagctcgccgtcgaccaggccgcgcgcatgctctacagatacaac
cttcctcatgagaaaaagaagccacggaatctgagcaagctgaatgatccctctacgtgg
gagaagaggaggctgaaagggaagcttgctgttcagaagatggttgtcaacttgatggaa
ttatatttacaaaggatgaggcagaggagaacgccgtaccgcaagcctgtggcaatggat
cagtttgctgctgaatttccttacgagcctaccccagaccaaaaccaggctttcgtggat
attgagaatgatctgactgaaagggaaacaccaatggacagattgatctgtggagatgtt
ggatttggtaaaacggaagttgcaatgcgtgctatattcattgttgtatctgcaggatat
caagctatggttcttgcaccaactgtaatactagccaatcaacactatgatgtaatgtct
gagcgtttctctaactatcctgatataaaggttgccatatttagtggtgctcagagcaag
gaagaaaaggatgggctaataacacagattaagaatggccatttgcaaataattgttggg
actcatgctcttcttacagaacggatgggctataacaatcttggtctcttagtggtggat
gaggaacagaagtttggtgtccaacaaaaggagaagattgcatcatacaaggcttctatt
gatgttcttaccctctccgcaactcccattccacgaactctatatcttgctttaactggt
tttcgcgatgcaagtttgatgtctacaccacctccagaaagagttgctgtcaagacctat
gtgtcagcatttagtagagaaagagctctatcagctatcaagttggagttgaagcgtggt
ggccaagttttctatgttgttccccgaataaaagccatagatgatgtattgcaatttctc
aaggactctcttccagatgtaccaatggctgttgcacacggaaagaaagtgtcaaagaat
atacaacttgctatggaaaagttttcttgtggagatataaagattcttgtatgcacacat
atcattgaaagtggaatagatattccaaatgccaacacaatgatagttcagtacgcagaa
ctatttggtctcgcccagctatatcagttgcgaggaagagtaggaagatcaggcagagag
ggttatacatacctcttctacactgacaagtctttgctctccagaattgctatggataga
cttggagctattgaagagcattcagatctgggtcaaggtttccatgttgcagagaaggat
atgggtattaggggattcggaagcatgtttggtgagcagcaatctggagatgttgcaaac
gttggcatcgatctgttctttgatatgctttttgatagcctgtcaaaggttgatcaattt
tgtcttaaccctgttccttacaaagatgttcagctggatataaatatttcgccacatctc
tcctctgaatacataagttatcttgaaaatcctgttgaattgctgaatgaagcagcgaaa
gctgcagaaaaggacatattgaccttaatgcaatttacagaagatcttcgtcgacgatat
gggaaggagccccgtgatatggagttgctattaaaaaagctctatgtcaggcggatggca
gcagatcttggtatcagtcggatatatccatctgggaaaatgatcatcatgaaaacaaac
atgaataagaaagtttttaggcttatggcagaagcaatggcttctgggacacatcggaat
tccctatcattcactggaaaggaaattaaggctgaacttctggtcaatctgccagacaca
ctacttctgaactggcttttccattgcttagcagattgctattcagtaatgccagccctt
gtgaagtactag
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