Lolium rigidum (rigid ryegrass): 124702911
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Entry
124702911 CDS
T09103
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124702911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124702911
03036 Chromosome and associated proteins [BR:
lrd03036
]
124702911
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124702911
Coactivators
SAGA/TFTC/STAGA complex
124702911
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124702911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
124702911
NCBI-ProteinID:
XP_047091052
LinkDB
All DBs
Position
3:204608917..204616296
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AA seq
663 aa
AA seq
DB search
MLIPILRRYLDKDRDIQVQSIFAKLRKNEISKEHFLKVIRTIVGDKLLKQAASQYQMQAA
QAQRNPPASASNFSLLSQVSGQQNENPRPPQFRPSTSGQMQSNMGYAASEGNLQKPNETG
NMSDRKGVHMLQSRPPNIHSTPVQATQHHLQRPQTSLPVFGANNIHPRPFPQSVGGSIAP
LRPQMADSSQRGQFLQGGVATRPALQSNQPSRPQQSNKEQKANSFIPTAHMNKETVNQPS
ESAQSSFATSNAKQVNPALLSSKGGGILENQSSALASSKSLTTASSSQPHRSHGTPTELN
MQIQPGTQAPPSGAASKTPQKKSSAGQKKPLEAIGSSPPPSSKKQKGSGGFHDQSIDQLN
DVTAVSGVNLREEEEQLFSAPKEESRVSEAARKVVQLEEERLILQKEPLTKKLAEIMRKY
NLKSIGSDVERCLSMCVEERLRGFMSSIIRLSKQRVDVEKSRHHIYPLSSDVRSHILRVN
REAREQWDRKLAEDADRIRKQNDGDDSSVVSSEKDRAESRGTSKHAKAYKEEDDKMRTTA
ANAAVRVAAGGDDMLSKWQLLAEKNKQRGEGGDGSSGSLPGTMSPHRPSPKAGKGSREQQ
DNEKRGYFSMLGPGGVRRSAHMKVARSIKVKDVVAALEREHQMSKSSLLFRLHGRHPTEP
AGK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcccaattttgagacgctaccttgacaaagacagggatatacaagttcagtcc
atttttgcaaagttacggaaaaatgagatcagcaaggaacattttttaaaggttattagg
accattgttggtgataagttactcaagcaagccgcttcacaatatcaaatgcaggctgct
caggcacaacggaatcccccggcaagtgcgagcaacttttctttgttaagtcaagtttca
ggtcagcaaaatgagaacccaagaccacctcagtttcgaccttcgacgtctggccaaatg
cagagtaacatgggttatgcagcttcagagggaaatttgcaaaagcctaatgaaactggt
aacatgtcagatagaaaaggagtgcatatgctacaaagccgcccacctaatatccactcg
accccagtgcaagcaacacaacatcatctgcagcgtccccagacatctttgccagtgttt
ggggcaaataatattcatcctcgtccatttccacagtcagttggaggttcaattgcgcca
cttagaccacagatggcagattctagtcaaagaggacaatttctccaaggaggtgttgcc
acacgaccagcactgcaaagtaatcaaccttcacggccacaacaatcaaacaaggagcag
aaagctaactctttcatcccaacagctcatatgaacaaagaaactgttaatcagccctct
gaatctgcacaaagttcttttgctacctcgaatgcaaaacaagtcaacccagcactgtta
tcttcaaagggtggtggtatcttggaaaatcaatcatctgcgctggccagttctaagtct
ttgactacggcaagctcaagtcaacctcatcgatctcatggaactccaacagagctcaac
atgcagattcaacctggtacccaagcacctccttctggagcagcttccaaaacgcctcaa
aagaagtcatctgctggacagaagaaacctttggaagcaattggctcatcccctccacca
tcaagcaaaaagcagaagggatctggaggtttccatgatcaaagcattgaccagctgaat
gatgttactgcagttagtggtgttaatctgagggaagaagaggagcaacttttctctgct
ccaaaggaagagagtcgagtttcagaagctgctcgaaaagttgtacaactggaagaagaa
aggctcattctacagaaggaacctctgacaaagaaattagcagagatcatgaggaaatat
aatctgaagagcatcggtagtgatgtggaacgttgtctatcgatgtgcgttgaggagcgg
ttacgaggattcatgagcagtataataaggctttcaaaacagcgggttgatgttgaaaaa
tcaaggcatcatatttatcctttatcttctgatgttcggagtcatattttgagggtgaac
cgagaagctagagaacagtgggacaggaagctggctgaagatgctgacagaatcagaaaa
caaaatgatggagatgacagttcagttgtttcttcagaaaaggacagagctgagagccgt
ggcacatcaaagcatgctaaggcttacaaggaggaagatgataaaatgagaacaacagct
gcaaacgctgctgtgcgagttgcagccggaggtgatgacatgctttccaagtggcaattg
ctagctgaaaagaataaacagagaggtgaaggaggcgacggttcttctggctccctgcca
ggtaccatgtcgcctcacaggccttcacctaaagctggaaagggctcaagagaacagcag
gacaatgaaaagcgaggctatttttcaatgcttggacctggtggcgtaagaaggtcagca
cacatgaaagtggcacggagcatcaaggtgaaggatgtggttgcagcacttgagagagag
catcagatgtcaaaatcatctttactattccggttacatgggagacatccgacagaacca
gccgggaaatag
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