Lolium rigidum (rigid ryegrass): 124703042
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Entry
124703042 CDS
T09103
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124703042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124703042
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124703042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124703042
NCBI-ProteinID:
XP_047091207
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All DBs
Position
3:221869315..221873696
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AA seq
463 aa
AA seq
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MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFSDAAVA
ERVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSAHGSPGPSRTKKIFVGGLASTVTES
DFRTYFESFGSITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR
AVPKELSPGPSMRSPAGGINYVMNRTNSFLNGYTQGYNPSPVGGYGVRMDARFGLLSGGR
SSYPSFGGGYGVGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISYGGV
GENSGSVFNSLARNLWGNSGLNYSSNSANSSSFMSSANGGLGGIGNNNVNWGTPPVLSQG
GNAGSGYGSGNFGYGSSENNFNLSPSAYGRNAGSGGVNASLNQSSNGYGRNFGDSSAGGG
ASIYGDTTWRSGSELDGTSPFGYGLGNAASDVTAKSSAGYMGH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgccgggaagctgttcatcggtggcatctcgtgggacaccaacgaggac
cgcctcagggagtactttgagaagtatggagaggtggtggaggccgtcatcatgcgcgac
cgggcaactggccgtgcccggggcttcgggttcatcgtgttctccgacgcagcagtcgca
gagcgtgtcataatggagaagcatatgatcgatggccgcatggtggaggccaagaaagct
gttccgagggacgatcagcaagctcttagcaagagtggtggcagtgctcacggatcacca
gggcctagtcgcaccaagaagatattcgtcgggggtcttgcatccaccgtcacagagtca
gacttcaggacatattttgagtcgtttggctcgatcactgatgttgttgtgatgtatgat
cacaacacgcagcgtcctagaggatttgggttcataacatatgattctgaagacgctgtg
gacaaggcattgttcaagacgttccatgaactcaatggtaagatggttgaggtaaagagg
gctgttcctaaggagctatctccgggacctagcatgcgctcgcctgctggtggaatcaac
tatgtaatgaacagaaccaatagctttcttaatgggtatacccaaggttacaatccgagc
ccggtaggtggctatggagtgaggatggatgctaggtttgggcttctatcgggtggccgt
agtagctatccttcttttggtggtggttatggagttggtatgaattttgacccagggatg
aacccgggcattggtggtagctcgaacttcaacaatagtgtccagtatggacggcagatc
aatccatactacagtggtaattcgggtagatacaatagcaacattagctatggtggagtc
ggtgagaattctgggtcagtgtttaactcgctggctcgtaatctatggggtaactcaggt
ctcaattactcttcaaactccgcaaattctagttcattcatgtcatctgcaaatgggggc
cttggcggaattgggaacaacaatgtgaactggggaacccctcctgtgctttctcaaggt
ggtaacgctggctcaggctacggcagtgggaactttggttatggatccagtgaaaacaac
ttcaatctgagtcccagtgcttatggaaggaacgctggatcaggtggcgtcaatgcttcc
ctcaaccaatcaagcaatggatatgggaggaactttggagattcttcagcaggtggcggt
gcctccatctatggtgacacaacctggagatctggatctgagcttgatggaaccagtcca
tttggatatgggcttgggaatgcagcttcagatgttacagcaaagagctcagcaggttac
atggggcattaa
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