Lolium rigidum (rigid ryegrass): 124703180
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Entry
124703180 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124703180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124703180
03036 Chromosome and associated proteins [BR:
lrd03036
]
124703180
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124703180
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124703180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
124703180
NCBI-ProteinID:
XP_047091361
LinkDB
All DBs
Position
3:complement(238461749..238467324)
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AA seq
709 aa
AA seq
DB search
MFGSSNRSLFGQKSSFGGFGSSPNQSTTFGNNNFGTTTTPTFGASTSTSLFGAPGTSTFG
STTTPGFGSSPSFGQSGAATSSTLFGTTPSSPFGLPTAPPTFGQTTFGNQSGGTRIQPHV
QTPDPDGATSGSQASKLDSISAMPAYKEKSHEELRWEDYQRGDKGGPNTTPVVNNFSPSP
QPSFPISQPAPVNPFSSISNSTGAFGTTPSLFPSPGTTLFGQSTGSPFQANTSQSLFANT
TPSIFGSSSAITTPFSFGPSFNNNSQSAGLFPSLSSPAIGQQPSSHSFNQQTTSSSAFST
SIFNNTTNVGTAGGQFVPTSSPFPMFPQPAPVQPSSSFSFQPQGQPGGFSGVSKPMNMAP
FGQQTSSQSSMVMQPTLVSNPFGTLPAMPQMSIGNGGSSPSIQYGISSLPVAEKPHPSRT
LSMVVPRHLSQRRIKLLPRKYNATSDGKVPFFADDEESSVTPKADAFFIPRENPRSLIIR
QTDQWPSRSAVDRQPIPRDSAHLDEDKDAFVGRERNKAAMSPARSGQAGNSHDASSEPEA
FVRHVNGASIEKMMPKLSQADYFTEPSLEELAAKERSEPGYCRQVRDFVVGRQGYGSIKF
LGETDVRGLDLESVVEFNNREVVVYKEDSEKPPVGEGLNKAALVTLLNIKCMNRKTGEPC
TEGPRLDKFKETLVKTAKEQGAEFVSFDGAKGEWKFRVKHFSSYGFGES
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcttccaaccgatctctgtttggacaaaagtctagtttcggtggttttggt
tcatctcctaaccagtctactacatttggcaacaacaattttggcaccacaactactccg
accttcggtgcctctacatcaacatccttatttggtgctcccggcacctcaacgtttggt
tcgaccactactcctggatttggatcttctccgtcttttggacaatcaggagctgcaact
agtagcacgctgttcggaacaactccgtcttctccatttggcttgccgacagcaccacca
acgtttgggcaaactacatttgggaatcaatctggaggaaccagaatacagcctcatgta
caaacaccagatcctgacggtgctacgagtggttctcaggcttcaaaacttgattccata
tcagctatgcctgcatacaaagagaagagtcatgaagaattgaggtgggaagattaccag
cgtggggacaaaggtggaccaaacacaactccagtggtgaataacttctcgccatctcca
cagccaagttttccaatcagtcaaccggcgccagtgaatccattttctagtatctcaaat
tctactggtgcttttggtactacgccgagcctgtttccgtcccccggaacgaccttgttt
ggacaatcaactggttctcccttccaagcaaacacttcacaatctctgtttgcaaatacc
actccttcaatattcggctcgtcatcggcaatcacgactcctttcagttttggcccatcc
tttaacaataactctcaatcagctgggctgtttccgtctttgtcttcccctgcaattggg
caacagccatcgagccactcatttaaccagcagacgacaagcagttcagctttctccacc
agtattttcaacaacacgactaatgttggaacagccggaggacagtttgtccccacatct
tcaccttttccaatgtttccacaacctgcccctgttcaaccttcaagttcgttctcattc
caacctcagggccaaccaggtggattctctggagtttccaaaccgatgaatatggcccca
tttggacagcaaaccagtagtcagtccagtatggtaatgcagccgactcttgtttcaaat
cccttcgggacacttccagcgatgcctcagatgtccattgggaatggtggatcctcacct
tccatccaatatggaatatcaagtttaccggttgctgagaagccccatccgagtagaaca
ttatcaatggtggtgcctaggcatttgtcacagaggaggataaaactgttgccacggaaa
tataatgcgacatctgatggcaaggttccgttctttgctgatgatgaagaatcttccgta
acgccaaaagcagatgcctttttcatccctagagaaaacccaagaagtctgataatccgt
caaacagatcagtggccttcacgtagtgcagttgaccgacaaccaattccaagagattca
gctcatcttgacgaagacaaagatgcttttgttgggagggagcgcaataaggctgccatg
tcaccggctcggtctggtcaagcaggaaatagtcatgatgcatcaagtgagcctgaggct
tttgttcggcatgtgaatggtgctagcattgagaagatgatgcctaagctctcccaggca
gattacttcacggagcctagcctagaggagcttgcggcgaaagaacgttctgaaccaggc
tactgccgtcaggttagagactttgttgtcggacgtcaaggctatggcagcatcaaattc
ttgggagaaacagatgtgaggggccttgatctggagtcggtggtggaattcaataaccgt
gaagtggtcgtgtacaaggaggacagcgagaagcccccagttggcgagggcctgaacaaa
gctgcattggtgactcttttgaacatcaagtgcatgaataggaagacaggtgagccctgc
accgagggtccgaggctggacaagttcaaggagacgctggtgaagacggccaaggagcag
ggagctgagttcgtgtcatttgacggcgccaagggcgagtggaagttcagggtgaagcac
ttcagctcctatggatttggcgaaagctga
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