Lolium rigidum (rigid ryegrass): 124703232
Help
Entry
124703232 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124703232
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124703232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_SPT8
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
124703232
NCBI-ProteinID:
XP_047091406
LinkDB
All DBs
Position
3:complement(246356038..246360297)
Genome browser
AA seq
480 aa
AA seq
DB search
MGRTVKKKSKSKKTKASKKTEASSSASPAAASGPAKVWQPGVDELEEGEELQFDPEAYNY
LRGFSTGWPCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAEKAAWNYVAVFKLSNIQGKKR
EPIPSSKLDADSDMDSDNSSDDDEEEEEINEDIKPILQLKKVAHAGXVNRIRSMTQQPHI
CATWGDTGHVQVWDFKPFLNSLADSGPVAHKEEDIIHNHVPLKVFSGHKDEGYAIDWSPH
VIGRLVSGDCNKSIHLWEPSSNTWEVDTQPFVGHSASVEDLQWSPTEANIFASCSVDGKI
CIWDIRTGKQPAISVKAHNADVNVISWNRLASCMIASGCDDGSFTIRDLRLIKADSLVAH
FEYHKHPITSVEWSPHEASTLAVSCADHQLTVWDLSLEKDAEEEAEFRAKMKEQANAPED
LPPQLLFVHQGQKDLKELHWHPQIPGMILSTAADGFNVLMPSNIDTTIAGAETPTVALPG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcacagtcaagaagaagtccaagtccaagaagaccaaggcgtccaagaaaact
gaggcttcatcttctgctagccctgcggcggcttctggtccagcaaaggtatggcaacca
ggcgtagatgaactagaggagggggaggagctccagtttgatcccgaggcttacaactat
ctccgaggttttagtactggctggccatgcttgagctttgatgttgtgcgcgaccaactt
gggcttgtccgatcagagttcccacacacattatatggcgttgccggaactcaggctgaa
aaggctgcatggaattatgttgccgttttcaagctttccaacatccaggggaagaagcgg
gaacccataccatcttcaaaacttgatgctgacagtgatatggatagtgacaacagcagt
gatgatgatgaagaagaagaggaaatcaatgaagatataaagcccatcctacagcttaaa
aaggtggcccatgcagggngtgtaaaccgaatacgctcaatgactcaacaaccacacata
tgtgctacatggggagacacaggtcatgttcaggtgtgggacttcaaacccttccttaat
tcactagcagattcaggacctgttgcacacaaagaagaggacataatccataatcatgta
cctttgaaagtatttagtggccataaagatgaaggctacgcgattgattggagtccacat
gttattgggagacttgtttctggtgattgtaacaagtccattcacctctgggagccatct
tcgaacacttgggaagtagatacacaaccttttgttggacactcagccagcgttgaggat
ctgcagtggagtcccacagaagccaacatttttgcctcttgttcagtagatggaaaaata
tgtatttgggatatcaggacagggaagcagcctgctatttctgtgaaggcccacaatgct
gatgtgaacgttatctcctggaatcggcttgctagctgtatgatagcttcaggatgtgat
gatggcagtttcacaattcgtgatcttagattaatcaaggctgactcattggtagcacat
tttgagtaccacaagcacccgattacatctgtggaatggagtccacatgaagcatcaaca
ttggctgtatcatgtgctgatcatcaactcacagtttgggatctttcattggaaaaagat
gcagaagaggaagctgaattcagagctaagatgaaggagcaggcaaatgctcctgaagat
ttgcctccacaacttctctttgttcatcagggccagaaagatttgaaagaattgcactgg
cacccacagatacctgggatgatcctgtcgacagcagctgatggcttcaacgtgctgatg
cctagcaacatagatacaaccatagctggggccgagacacctactgtagcgctgcctggc
taa
DBGET
integrated database retrieval system
