Lolium rigidum (rigid ryegrass): 124703353
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Entry
124703353 CDS
T09103
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124703353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124703353
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124703353
Membrane trafficking [BR:
lrd04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124703353
Atg1 complex
124703353
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124703353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
124703353
NCBI-ProteinID:
XP_047091526
LinkDB
All DBs
Position
3:complement(259858155..259863548)
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AA seq
592 aa
AA seq
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MATTSSEPPMVEQVITEFFAKSLHIILESRSPYESSRSFTRPSPPSSPLSGSQPRDRWFN
LALRDCPAALENFDLWRQSNLEPLVIDIVMMHRESTNTTSTGGGKIIERWIIQYETSKSG
SGSKSHSRKSRHSSAEDHSLYRSAYKGSTVLFRSLHLVVRLLPAYNLFRELNSSGRIRPL
NLSHKISSFVEPFTRAEDAEMRHYTFAPIETLFGCLSLSVSYVPVLEVVAAPERTTPMPT
ELIMDYVGSPTTDFLRNFSSLPSDGIVPPSAAMARRHSWSIEHGARPSASPSPASMNSEP
GGCLQPHALLHEHPPHSTGKKKTTGYEECYPSPPLSPSPSHSPPATYPKNPLFRYESAPV
VIPTVRGGGGGSGLPPSPSLKGKKHQSSQNYLTPSPDGNSNTRNDLVKFGEFENNKAPQK
VLSFGKDDLGYFHGLKLTRTSSKLFITDELDERELAFAWEDRDIIIDQLNRACISDRGCQ
GANQDTGGSVMRTPAATIGALVRMLKTAPGLREGRPSIAAPPPVPQESSVQRVMTGEHGD
VASSPALIQSKTAADALEELKKYKAIRESILNRTKVLPQDPETGEKPVNGDP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacttcctcagagccgcccatggtggagcaggtgattaccgagttcttcgcc
aagagcctccacatcatcctggagtcacgctcgccatacgaatcatcacgcagcttcacg
cggccttcgccgccgtcttcacctctgtctggcagccagccacgtgaccggtggttcaac
ctcgcgctcagggactgtccagccgcacttgagaacttcgacctgtggaggcagagcaat
cttgagccattggttattgatattgtgatgatgcaccgtgaaagtaccaacaccaccagt
actgggggtggcaagatcatagagaggtggattatacagtatgaaaccagcaagtctgga
agtggcagcaagagccacagcaggaagtctaggcacagctcggctgaggatcacagcttg
tacaggagtgcatacaagggctcaacagtgttattccggtcgctgcatctggttgtcagg
ctcttgccagcctacaatctcttcagggagctgaattcatctgggagaatccgtccactg
aacctgtctcacaagatatcatcatttgtcgagcccttcactcgggcagaggatgctgag
atgaggcactacacatttgctccaattgagactctgtttggctgcctgagcttgtcagtt
tcttatgtgccagtgctggaggttgtggctgcacctgagcgaaccacacccatgccaacc
gagcttataatggattacgttgggagtcccacgacagacttcctcaggaatttcagttca
ctgccttccgatggcattgtacctccttctgctgcaatggccagacgccacagttggagc
atcgagcatggagctagaccatcagcatcgccatctcctgcttccatgaattcagaacca
ggtggatgcctacagccacatgcgcttttgcatgaacatcctccacatagcactgggaag
aaaaaaactacaggatatgaagaatgctatccatccccacccctgtcaccatcaccatcg
cattcccctccagctacctacccgaaaaatcctttgttccgatatgagagtgctcctgta
gttattcccactgtaaggggtggtgggggaggcagtgggctgcccccgtctccatctttg
aagggtaaaaaacaccagtcatctcaaaattacctgacaccatctcctgatggtaactca
aacacaaggaatgatttggtcaaatttggtgaatttgagaataacaaggccccacaaaag
gtattgtcttttggtaaagatgatctgggatattttcatggactgaagttgactcggacc
tcaagcaaactttttatcacggatgaactggatgagcgggagttggcatttgcatgggaa
gatagagatatcatcattgatcaacttaatagggcttgtatctcggataggggatgccaa
ggggcaaaccaggacactggaggctcagtgatgaggactccagctgcaaccatcggagct
cttgtgcgaatgctcaagacggccccgggcctcagggaaggccggccatccatcgcagct
cctcccccagttccccaagaatcttcggttcagagggtcatgaccggggaacatggcgat
gttgcatcgagtcctgctttgatccagtcaaagactgcagcggacgcgctggaggagctg
aagaaatacaaggctatcagagaatcaatactgaatcggacgaaagtgctgccccaggat
cccgagacaggggagaaacccgtcaatggagatccttag
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