Lolium rigidum (rigid ryegrass): 124703711
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Entry
124703711 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124703711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124703711
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124703711
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
HECT type E3
124703711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
124703711
NCBI-ProteinID:
XP_047091888
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All DBs
Position
3:310843936..310859933
Genome browser
AA seq
1155 aa
AA seq
DB search
MSVPPSGHRQVSLRGSSAKEITRDALLQKVSEERQLRSHLRRAAAAALTVQRVWRRYHVM
KKVSEQLHDEWEVLINQPDINLTNQWISIKMLRPFLFFITQPSSWYKGQQTKTVKSISRC
FRIILNSINSFDASRNFCSFAVGSPEERSIWLYQTKKLISLCSCILARCDNSCCKDVNMV
EITAITMRLAISLTDCKTWKNLTSENTRAADASVESLIEFIGTRKSGTYSCVRRYIKCFG
PHATPGKIDSVIAPDDQLLVTASAVTVALRPFNTTRSDRGVDLTGAAKEYFTLILTIPYL
CKRLPPLLLPALKHISVLQPSLSILLQISKDKIFEEIVKLEQSEVSGAGASTIPYCGWAL
GNLVTLATEHDDLSNSGCFIQGLDCCLYVDAISSISQNLLKCLEESKGRLQQVDDSATHD
TSVTEEMRTLFMDLLKPIYQQWHLRKLLVLAKEYVSCKRETNHELTLRQVHFRSLKLTDV
ICFYYYMLRIFSSLNPLVGPLPILNMLSFTPGFLVDLWGTLEISIFGQAIHKSEEPEHDK
QLAGSSSGEQISSTRQRRNAKDTPNKWVNVLQKIKGKPSDADDTNLSGSPLNSENSNDVA
LVLWDIETMRQGSEGIGKDIMRMLHLFCAIYGHLLLVLDDLEFYEKQVPFTLEQQRKIAS
ALNTFVYNSFLQNSGSSNKPLIDVTVRCLNLLYERDSRHRFCPKSLWLAPARTGRIPIAA
AARAHEAAFATLAGSTSGIPTRSSVLTTVPHVYPFEERVQMFREFIELDKASRRVTGEVS
GPGPGSIEIVIRRGHIVEDGYRQLNCLRSKLKSCIHVSFVSECGLPEAGLDYGGLSKEFL
TDMSKAAFSPDYGLFSQTSTSDSSLIPSSSAKLLDNGIDMIEFLGRVVGKALYEGILLDY
CFSQVFVQKLLGRYSFLDELSTLDSELYRSLMQLKHYEGDVEDLCLDFTLTEELGGKRIV
HELRPGGKNISVTNENRMQYVHAMADFKLNRQILPFSNAFYRGLSDLISPSWLSLFNANE
FNQLLSGGSQDFDVDDLRNHTKYTGGYTESSRTVKLFWEVIKGFKPTDRCLLLKFVTSCS
RAPLLGFKYLQPCFTIHKVPCDVPLWATIGGQDVDRLPSASTCYNTLKLPTYKRSSTLRS
KLVYAISSNTGFELS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcccgccctccggccaccgccaggtgtccctgcgggggtcgagcgcgaaggag
atcacccgcgacgcgctgctgcagaaggtctccgaggagcggcagctccgcagccacctc
cgccgcgccgccgccgccgccctcaccgtccagcgagtatggagaaggtaccatgtcatg
aaaaaggtttcagaacaacttcatgacgagtgggaagtattaataaaccagcctgacatc
aacctgacaaatcaatggatatcaatcaagatgcttaggccatttcttttcttcattact
caaccatcaagctggtacaaggggcagcagaccaagactgtgaagtctatctcaagatgc
ttcagaatcatcttgaatagcataaactcattcgatgcaagcagaaatttctgttccttt
gctgtgggttctccagaagagagatctatctggctttatcagacaaaaaagctgatttcc
ctgtgctcttgcattcttgccaggtgtgacaattcttgctgcaaggatgtaaacatggtt
gaaattactgctattactatgcggttggccatctcattaactgattgcaaaacatggaaa
aacttaacaagtgagaatactagagctgctgatgcctctgtggagagtttgattgaattt
attggcacaagaaagagtggtacatatagctgtgtgaggagatatataaaatgttttggt
ccccatgctaccccagggaagatagattctgtgattgccccagatgaccagctcctggtt
actgctagtgcagtcactgttgcattacggcctttcaacaccacaagatcagacaggggt
gttgatctaactggtgctgcaaaggaatacttcacacttatactcacaattccgtatctc
tgcaaacgtcttccaccccttctgttacctgctttaaaacacatatctgtactgcaaccg
tctctcagcattttactgcagatctccaaggataaaatatttgaagaaattgttaagcta
gagcagtcagaggtttctggtgctggtgcaagtaccattccttactgtggttgggctctt
ggaaatcttgtaactttagccacagagcatgatgatttgtccaattcgggttgcttcatt
caagggctagactgttgcctatatgttgatgctattagctctatttcccaaaacttactg
aaatgtttggaagaaagcaagggaaggcttcaacaggttgatgatagtgccactcatgat
acatcagttactgaagaaatgagaacattgtttatggaccttctaaagccaatttaccag
cagtggcaccttaggaagctattggtactggcaaaggagtatgtttcatgcaagagagaa
accaaccatgaacttaccctaaggcaggttcattttcggagcctaaaattgacagatgtt
atatgcttttactattacatgctcagaattttctcttctctgaacccacttgttggtcca
ttgcctatcctcaacatgctctcattcaccccgggatttcttgttgatttatgggggaca
ctagaaatatccatttttggccaagctatccacaaatcagaggaacctgagcatgataaa
caattggctggaagtagctcaggtgaacaaatatcctccacaaggcaaagaaggaatgcc
aaggacacaccaaataagtgggtaaatgtgctccagaagattaagggaaaaccaagtgat
gcagatgacaccaatttgagtggcagtcctttgaattctgaaaattctaatgatgttgca
ttagttttatgggatattgaaactatgaggcaaggatctgaaggtattgggaaggatata
atgcgcatgttgcatctgttctgtgcaatatatggacatctattacttgtgctagatgat
cttgagttttatgagaaacaggttcctttcactctagagcaacaacggaagattgcatca
gccctcaatacgtttgtgtacaattctttccttcagaatagtggaagcagcaacaagcct
cttatagacgtgacagtgagatgtcttaatttactctatgaaagggacagcagacatagg
ttctgtcccaaatccctgtggttggcacctgccagaactggcaggattccaattgcagct
gctgccagagcccatgaggcagcctttgctactttagcaggaagtacttcaggaattcct
acccgcagctctgtccttaccaccgtaccacatgtatatccatttgaagagagagtacag
atgtttagagaatttattgagttagacaaggcatctcgaagagttacgggtgaagtctct
gggccaggtccaggatccatcgagatagttattcgacgaggtcacattgttgaagatgga
tataggcagttgaattgtcttagatcaaagctgaaatcttgcattcatgtatcgtttgtc
agtgaatgtggcctccctgaagctggtttggactatggtggtctatcaaaggagttctta
actgatatgtccaaggctgccttcagcccagactatgggctgttttcacaaacatcaaca
tctgatagtagcttaattccaagcagttctgctaagctgttggacaatggcattgatatg
attgaatttcttggtcgagttgttggcaaagcactatatgaggggattctcttggactac
tgtttttcacaagtatttgtccaaaaacttctaggccgctatagttttttggatgaatta
tcaacacttgattctgagctttatagaagtctaatgcaactcaagcactatgaaggggac
gtcgaagacctttgtttggattttactctgactgaagagttaggcgggaaaagaattgtg
catgaactgagaccgggtggtaaaaatatctccgttacgaatgaaaatagaatgcagtat
gttcatgcgatggcagatttcaagcttaaccgccagatacttccgttttcaaatgcattt
tacagaggactcagtgatctcatctcaccatcttggctgagcttgtttaatgcaaatgaa
tttaaccagttactttcaggaggatcgcaggattttgatgtcgatgacctgcggaaccac
accaagtacactggtggttataccgagtcaagtcgaactgttaaactcttctgggaggtc
atcaaaggatttaagccgaccgatcgttgcctgctactgaagtttgtgacaagctgttca
cgagctccactactaggattcaagtacctgcaaccttgtttcacaattcacaaggttcca
tgtgacgtgccactttgggctacaattggagggcaagatgtggatcgtcttccatctgct
tcgacatgttacaatacgctcaagcttccaacatacaagaggtcgagcacactgaggagc
aagctcgtgtacgcaatcagctcgaatactgggtttgaactctcgtag
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