Lolium rigidum (rigid ryegrass): 124704034
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Entry
124704034 CDS
T09103
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124704034
03015 mRNA surveillance pathway
124704034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124704034
03041 Spliceosome [BR:
lrd03041
]
124704034
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124704034
Spliceosome [BR:
lrd03041
]
Complex C
Other components
EJC/TREX
124704034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF5520
Motif
Other DBs
NCBI-GeneID:
124704034
NCBI-ProteinID:
XP_047092227
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All DBs
Position
3:complement(348775989..348780178)
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AA seq
402 aa
AA seq
DB search
MAAASEKTAEDIRRELQELQRQHREISERLRDPRGLRRGAPPTGPGGPRPLRGFQRPAPE
PVDQPEPKRRLLSAVVKVDSAEAKEEDANNAAAAEGRENGGSVAAEGAERRGAGNGGFRR
DGTQWVSRRELDKALPEPLPRQFPKDDDQSLVRRNRRMLGKLLVGTLEKFQQEDKKLSNS
EAFMRRSEAQQKADQKAREDSERLRQQEREQAAEKRRRDMTLRARVAAKAEEKRLELLYL
QWTEHHKKLSNFLRTKAEPAIYYMPVKPLSDDPAIVEQTKEKTFEEWKSVRRAELNQFQK
QVEEHYLSNVEKQLERIQNARNARKGNVPANMQEMDKELDTHRAEHGPKARRIPDGDNDE
DEDVDDMAVEDYLMDEVLGVSEDPTKPSEETTDVAPVPDEAQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgtcggagaagacggccgaggacatccgccgcgagctccaagagctccag
cgccagcaccgcgagatcagcgagcgcctgcgcgacccccgcggcctgcgacgcggggct
ccccccaccggccccggcggcccccgcccgctccgcggcttccagagacccgctccggag
ccagtggaccagcccgagccgaagcgccgccttctatccgccgtggttaaagtggacagc
gctgaagctaaggaggaggatgcgaataatgcggcggcggcggaggggcgtgagaatggt
ggttcggttgctgctgaaggtgctgagaggaggggtgccggtaatggtgggttcaggagg
gatgggacccagtgggtgtcaaggagggagctcgataaggcgctgccagagcctctcccg
aggcagtttcccaaggatgacgaccagagcttggtgaggaggaacaggagaatgctaggg
aagctccttgttggcacgctagagaaatttcagcaagaggacaaaaaattgtccaactca
gaggcttttatgcgtcgatcagaggctcagcagaaggctgatcaaaaggctcgtgaggac
agcgaaagattgcgacagcaagagcgggagcaagcagcagagaagcgtaggcgcgatatg
acacttcgtgcgcgagtagctgctaaggcagaagagaagaggttggagctgttgtaccta
cagtggactgagcatcacaaaaagctgtccaatttcttaaggacaaaagctgaaccagct
atttattacatgccagttaaaccactaagtgatgatccagctattgttgagcagaccaag
gaaaagacattcgaagaatggaagtctgtacgtagggctgagctgaaccagtttcagaag
caagttgaggagcactatttgtctaacgtcgagaagcagctggaaagaattcagaatgcc
cggaatgctcggaaggggaacgtccctgctaacatgcaggaaatggataaggagctggac
acacacagggcagagcatggtccaaaggctcggcggatccctgacggtgacaacgacgag
gatgaagacgtagacgatatggctgtggaagattacctgatggatgaagtccttggcgtc
agcgaggacccaaccaagccgtctgaagagactactgatgttgctcctgtacccgacgag
gcacagtag
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integrated database retrieval system