KEGG   Lolium rigidum (rigid ryegrass): 124704034
Entry
124704034         CDS       T09103                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03013  Nucleocytoplasmic transport
lrd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124704034
   03015 mRNA surveillance pathway
    124704034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124704034
   03041 Spliceosome [BR:lrd03041]
    124704034
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124704034
Spliceosome [BR:lrd03041]
 Complex C
  Other components
   EJC/TREX
    124704034
SSDB
Motif
Pfam: Pinin_SDK_memA DUF5520
Other DBs
NCBI-GeneID: 124704034
NCBI-ProteinID: XP_047092227
LinkDB
Position
3:complement(348775989..348780178)
AA seq 402 aa
MAAASEKTAEDIRRELQELQRQHREISERLRDPRGLRRGAPPTGPGGPRPLRGFQRPAPE
PVDQPEPKRRLLSAVVKVDSAEAKEEDANNAAAAEGRENGGSVAAEGAERRGAGNGGFRR
DGTQWVSRRELDKALPEPLPRQFPKDDDQSLVRRNRRMLGKLLVGTLEKFQQEDKKLSNS
EAFMRRSEAQQKADQKAREDSERLRQQEREQAAEKRRRDMTLRARVAAKAEEKRLELLYL
QWTEHHKKLSNFLRTKAEPAIYYMPVKPLSDDPAIVEQTKEKTFEEWKSVRRAELNQFQK
QVEEHYLSNVEKQLERIQNARNARKGNVPANMQEMDKELDTHRAEHGPKARRIPDGDNDE
DEDVDDMAVEDYLMDEVLGVSEDPTKPSEETTDVAPVPDEAQ
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggccgccgcgtcggagaagacggccgaggacatccgccgcgagctccaagagctccag
cgccagcaccgcgagatcagcgagcgcctgcgcgacccccgcggcctgcgacgcggggct
ccccccaccggccccggcggcccccgcccgctccgcggcttccagagacccgctccggag
ccagtggaccagcccgagccgaagcgccgccttctatccgccgtggttaaagtggacagc
gctgaagctaaggaggaggatgcgaataatgcggcggcggcggaggggcgtgagaatggt
ggttcggttgctgctgaaggtgctgagaggaggggtgccggtaatggtgggttcaggagg
gatgggacccagtgggtgtcaaggagggagctcgataaggcgctgccagagcctctcccg
aggcagtttcccaaggatgacgaccagagcttggtgaggaggaacaggagaatgctaggg
aagctccttgttggcacgctagagaaatttcagcaagaggacaaaaaattgtccaactca
gaggcttttatgcgtcgatcagaggctcagcagaaggctgatcaaaaggctcgtgaggac
agcgaaagattgcgacagcaagagcgggagcaagcagcagagaagcgtaggcgcgatatg
acacttcgtgcgcgagtagctgctaaggcagaagagaagaggttggagctgttgtaccta
cagtggactgagcatcacaaaaagctgtccaatttcttaaggacaaaagctgaaccagct
atttattacatgccagttaaaccactaagtgatgatccagctattgttgagcagaccaag
gaaaagacattcgaagaatggaagtctgtacgtagggctgagctgaaccagtttcagaag
caagttgaggagcactatttgtctaacgtcgagaagcagctggaaagaattcagaatgcc
cggaatgctcggaaggggaacgtccctgctaacatgcaggaaatggataaggagctggac
acacacagggcagagcatggtccaaaggctcggcggatccctgacggtgacaacgacgag
gatgaagacgtagacgatatggctgtggaagattacctgatggatgaagtccttggcgtc
agcgaggacccaaccaagccgtctgaagagactactgatgttgctcctgtacccgacgag
gcacagtag

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