KEGG   Lolium rigidum (rigid ryegrass): 124704058
Entry
124704058         CDS       T09103                                 
Name
(RefSeq) coatomer subunit alpha-3
  KO
K05236  coatomer subunit alpha
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124704058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lrd04147]
    124704058
Membrane trafficking [BR:lrd04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    124704058
Exosome [BR:lrd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124704058
  Exosomal proteins of bladder cancer cells
   124704058
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd TPR_COPA_B Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_ACSF4 ENTH Beta-prop_At4g14310 Fis1_TPR_C
Other DBs
NCBI-GeneID: 124704058
NCBI-ProteinID: XP_047092259
LinkDB
Position
3:complement(351201964..351207154)
AA seq 1214 aa
MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTHRCLFTLTGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR
LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSADTVFYVKDRFLRFFEYSTQKEVQVAPIRRPG
SVSLNQSPRTLSYSPTENAVLICSDVDGGSYDLYIVPKDSTGSLQDAKKGAGGSAVFVAR
NRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRL
VLGELQAAGVKYVVWSTDMESVALLSKHAVVIASKKLVHRSTLHETIRVKSGAWDENGVF
VYSTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLITVDASEYIFKL
ALLRKRYDHVMSMIKSSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIA
VASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGFMDKVGFMCK
IAGQNNNLMGQFHNALYLGDARKRAEILENAGQLPLAYATAATHGLTEIADRLAAELGEN
VPSLPAGKSRSLLIPPAPLISSVDWPLLRVMRGTFEVGLDATGRAEVEEDDDAVIADWDD
EDLNIVDASDAVANDDGFNAEEGEANEEDGEDGGWDLEDLELPPEADTPKAAGNTRSTVF
VAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKSLFLDLHMGSH
SYLRALATAPVVSIAVEKGWSESSSPNVRGPPALVFSFSQMEDRLKAAYKATTEGKFPEA
LRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELKDNVNRQQELAA
YFTNCKLQRVHMRLVLSNAMALCYKQKNLATAEHFARLLLENSPNEVQAKKARQVQQQCS
GKRDSAELNYDYRNPFVVCGSTYVPIYRGQKDISCPYCASRFVPSVEGQLCTICELAVVG
ADASGLLCSPTQQR
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcagcttccacccgcgg
cggccatggatcctcgccagcctacacagcggggtcatccagatgtgggactaccgcatg
ggcaccctcctcgaccgcttcgacgagcacgacgggcccgtccgcggcgtccacttccac
gccacccagccgctcttcgtctccggaggtgacgattacaagatcaaggtgtggaattac
aagacgcaccgctgcttgttcacgcttactggccacctcgactacatccgtaccgtgcaa
ttccaccacgagtacccgtggatcgtgagtgccagcgatgaccagacaatccggatctgg
aactggcaatcgcgcacctgcgtggctgtgctgaccgggcataaccactatgtcatgtgc
gcgtctttccaccccaaggaggacctggtcgtgtccgcgtcgctagatcagactgttcgt
gtctgggatattggcgctctgaggaagaagacggtgtcacctgctgatgacatcatgcgt
ctcactcagatgaacactgatctgtttgggggtgtcgatgcggttgtcaagtatgtcttg
gaaggccatgaccgtggtgtcaactgggcctcatttcatccttctctgccgctcattgtt
tctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaa
gtcgatactctgagggggcacatgaataatgtgtcctgtgtgatgttccatgcgaagcaa
gacatcattgtgtctaactcagaagacaaaagcatccgcatctgggatgccacaaagcgc
actggtattcagacatttaggcgggaacatgaccgtttctggattcttgctgctcaccct
gaaatgaatcttcttgctgctgggcatgacagtggcatgattgtgttcaaattagagagg
gagcgtccagctttcagcgtcagtgctgatactgtattctatgtgaaggacagattcctc
cggttctttgagtattccacccagaaggaagttcaggtggctccaataagaagaccaggc
tcagtcagcttgaaccagtcacccaggacactatcttacagtccaacagaaaatgctgtg
ttgatatgctcagatgtggatgggggatcatacgatctctacatcgttcctaaggattct
actggcagtttgcaagatgcaaagaagggagctggtggttcagctgtttttgtggcacgg
aataggtttgctgtccttgagaagagtagcaatcaagttttggtgaagaatcttaagaat
gaaattgtgaagaaaagtcctcttcctatagcgactgatgcaatttattatgccgggact
ggtaatttgttgtgcaaagctgaagaccgtgtgaccatctttgatctacagcaaaggcta
gttcttggtgaactccaggcagctggtgtcaagtatgttgtttggtccactgacatggag
tctgttgcattgctgagcaagcatgcagtagttatagctagcaagaagcttgtccatcgt
tccacactgcatgaaaccattcgtgtgaaaagtggtgcatgggatgagaatggtgtgttt
gtttactctacactgaaccatatcaaatactgtcttcccaatggagacagcgggatcata
aaaacccttgatgttcctatttacataacaagggttattgggaacaacattttctgtctg
gatcgtgatggaaagaacaaactgataacagtcgatgcttcagaatacattttcaagctc
gcccttctccggaaacgttatgatcatgttatgagtatgattaagagctcacagctgtgt
ggacaggcagtaatttcatatttacaacagaaagggtttccagaagttgctctccacttt
gtgaaagatgagaagacaagatttaatctagctcttgagagtggtaacatccaaattgca
gttgcttctgcaaaagagattgatgacaaagatcattggtacaggctgggaattgaggcc
ctgaggcaggggaatgttggtattgtggaatatgcataccagcggacaaagaattttgag
aggcttgcttttctgtatctcattactggtttcatggacaaggttggcttcatgtgcaaa
attgctggacagaataacaatctgatgggtcagttccacaatgcattgtatctcggagat
gctaggaagcgagctgagatcctggagaacgctgggcagctacctcttgcctatgctact
gctgccactcatgggctcactgaaattgctgataggcttgctgctgaattgggtgagaat
gttccttctctacccgcaggaaaatctcgctcacttttgatcccccctgcacctctcata
tccagtgttgattggccattgctccgtgtgatgcgtggtacttttgaggttggattggat
gctactgggagagcagaagttgaggaagatgatgatgctgttattgctgactgggatgat
gaggacttgaatattgtggatgcaagtgatgcagtggcaaatgatgatggttttaatgct
gaggagggcgaagcaaatgaggaggatggcgaggatggtggctgggatcttgaagatctg
gaattaccacctgaagcagatacacccaaagctgcaggaaatactcgctccaccgtgttt
gttgctcctacaccaggcatgcctgtcagccaaatttggactcagaaatcttctcttgct
ggcgagcatgcagcagcaggaaactttgacactgccatgaggttgcttagccgccagttg
ggtatcaagaactttgctcccctgaagtccttgtttctcgatctccatatgggcagtcat
tcatatcttcgtgcacttgcaactgcccctgttgtatcaattgctgttgagaaaggttgg
agcgagtcttcaagtcctaatgtgaggggccctcctgccctagttttctccttctcacaa
atggaagacagactcaaggcagcctacaaagccacaactgagggaaagttcccagaagcg
ctgaggcaattcctcagcatcttgcataccatccctcttattgtggtggactcacgaaga
gaagtcgatgaagtgaaggagctgatcgagatagtgagggagtatgttcttggtctaaga
atggaactcaagagaaaggaactgaaagacaatgtcaaccggcaacaggaattggcggcc
tacttcactaactgcaagcttcagagggttcacatgagacttgtgctctcaaatgccatg
gctctgtgctacaagcagaagaacttagcgaccgcagagcatttcgcgaggctgcttctt
gagaacagcccgaacgaggtccaagcaaagaaggctaggcaggtccagcagcagtgcagc
ggcaaacgagacagcgctgagctgaactacgactacagaaatccattcgtggtatgcggt
tctacatacgtccccatctaccgtggccagaaggatatttcctgcccatactgtgcatcc
cggtttgttccttcagttgaagggcagctttgtaccatatgcgagctggccgtggtcggc
gccgacgcctcaggcctcctgtgctcccctacacagcagagatga

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