Lolium rigidum (rigid ryegrass): 124704088 Help Entry 124704088         CDS       T09103                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism lrd  Lolium rigidum (rigid ryegrass) Pathway lrd04142   Lysosome biogenesis lrd04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lrd00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     124704088    04148 Efferocytosis     124704088  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lrd04131]     124704088 Membrane trafficking [BR:lrd04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     124704088 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_WDR35 TPR_Vps41 DUF8532 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  124704088 NCBI-ProteinID:  XP_047092289 LinkDB All DBs Position 3:354110486..354120495 Genome browser AA seq 984 aa AA seqDB search MVHSAYDAVELVSGVPGRIEAVASHAGKLLVAASDCSLRIYSPPAPADGEIRRDGPYALE RQEQRLWRRAPSAMEASATRDLLLSLSDWVALHRLPGLETVAVVSKTKGANVFAWDDRRG LLAAGRQKRLTIFRLDGRREFVEVKEFGVPDMVKSMAWCGDNICIGIRRDYMIINSVTGA LTEVFSAGRIAPPLVVPLPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVVIHKP YAVARLPRHVEIRSLRAPSALVQTVVLRDVQKLVQTDNCILAALSNSVYGLLPVPIGAQI VQLTASGEFEDALALCKLLPPEDSNLRAAKESSIHMRYGHFLFDNGSYEEAMEQFSDSHV DITYVFSLYPSLVLPQTHIIGEHDKLHDLPELARESSDVTDEMESYSLQLHDSDDKSPLE NKKMSHNSLIALVKYLQKKRNGIIDRATSEVTEEVVSGAVHHSLILSEPYKAKKSNKKRP QTLRSSVARELATVLDTSLLQALILTRQSSGAVELLKGLNYCDLKICEEFLKERSDYMVL IELYRSNDMHREALQLLNQLVEKSKSEMANTDSIKKINPQMIIEYLRPLCRSDPMLVLES SLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSETGINPNLQNE LVQLYLSEVLDWYKILKDEGNWTDKTYSPTRNKLISTLESNSGYNTDTLLKRLPQDALFE ERAIMYGKMNQHLRALSLYVHKLHMPERAVAYCDRVYEEGAQQPSKSNIYFNLLQIYLNP RKAEKEIEQKIIPVASQYPGIQRVSSTTKVRGGRMGRKVVEIEGAEDIRFSTSGTDNGRS DGDTDDVSDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVSFLEPLLRNSSE HRRNYMVIKNLILRANLEVKEDLYKRRQAVVKIDGDSMCSLCHKRIANSAFAIYPNGQTL VHFVCFRESQQIKAVRGSNSGKRR NT seq 2955 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcgtacgacgccgtggagctggtctccggcgtgccgggccgcatcgag gccgtcgcctcccacgccgggaagctcctcgtcgcggcctccgactgctccctccgcatc tactccccgccggcccccgccgacggcgagatccggagggacgggccctacgcgctcgag cgccaggagcagcgcctctggcgccgcgcgccctccgccatggaggccagcgccacccgc gacctcctgctctcgctctccgactgggtcgccctccaccgcctccccgggctcgagacc gtcgccgtcgtctccaagaccaagggcgccaacgtcttcgcctgggatgaccgccggggc ctgcttgccgccggccgccagaagcgcctcaccatcttccgcctcgacggtaggcgagaa tttgttgaggtgaaggaatttggtgttcctgatatggtgaaatcaatggcctggtgtggt gacaacatatgtattgggattaggagggactatatgatcataaatagcgtgaccggagca ttaactgaagtgttttctgctgggaggattgctcctccattagttgtgcctcttcctacc ggtgagctcctccttggaaaggataacattggagtatttgttgatcaaaacgggaaactt attcaagatggccggataatttggtcagatactcctgcttctgttgttatacataagccg tatgccgtggcacgtctgccacgacatgttgagatacggtctcttagagctcccagtgca ttggttcagacggttgtcctccgtgatgttcagaagcttgttcaaactgacaactgtata cttgctgcactttccaactcggtctatggtttgctgcctgttcctattggtgcccagata gtgcaattgactgcctctggagaatttgaagacgcgctggcattgtgtaagttacttcct ccagaggattcaaacctacgagctgcaaaggaaagctcaatacacatgagatatgggcac ttcttatttgataatgggagctatgaggaagcaatggaacaattttcggattcgcatgtg gatattacatatgtgttctctctatacccatctcttgttctgcctcaaacacacattata ggtgaacatgacaagctccacgacctgccagaattagcaagagaatcatctgatgtgaca gatgaaatggaatcatactctttgcaacttcatgactctgatgataaatctccactggag aacaagaaaatgagtcataattctctaatagcccttgtgaagtacttacagaagaaaaga aatgggattattgatagagcgacgtctgaagtaacagaggaggtggtctctggagctgtg caccatagcttaatcttatctgagccatataaggcaaagaagtcaaataagaaacgaccc cagacgcttagaagttctgttgctagagaattggcgactgtactggacacatctcttctt caagctcttattcttacaagacagtcatcaggagctgttgaattattgaaaggactcaac tattgtgatttgaagatatgcgaggagtttctgaaggaaaggagcgattatatggtgtta attgagctctataggagcaatgacatgcaccgtgaagctctccaattactcaatcagttg gttgaaaaatcaaagtctgagatggcaaatactgattctattaaaaaaattaacccgcaa atgatcattgaatatctcaggcccctttgtagatctgacccaatgctggttttggagtct tctttgtatgttcttgaacgcaacccgtcagacactattgagctctttttgtctgaaaac gttccagcagatttggtaaattcatatctgaaacagcatgctccaaatttgcagtcaact tacttagagctaatgctctcaatgagtgaaacggggatcaaccctaatctacaaaatgag ctggtgcaactctacctttctgaagttcttgactggtacaagattctgaaggatgaggga aattggactgataaaacgtattccccaacgcggaacaagttgatatctacattagagagt aattcaggttacaatacagacacacttcttaaacgtcttccccaggatgctcttttcgaa gagcgtgctataatgtacgggaaaatgaatcaacatctccgtgcattatctctgtatgtt cataagctccacatgccagagcgcgcagttgcatactgtgatcgtgtttacgaggaagga gcgcagcagccttccaagtccaatatttattttaatcttctccaaatttatctaaaccca agaaaagctgaaaaagaaattgagcagaaaattattccagtggcatcacagtacccggga attcagagggttagctctactactaaggtcagaggagggcgtatgggtagaaaggttgtt gagatcgaaggggctgaagacatacgctttagtactagtggaacagataatggtcgaagt gatggcgacacggatgatgttagtgatggaggccctataatgttgaatgaagcacttgaa ttgttaagccaaaggtgggacagaataaatggtgctcaggctcttcggttgttacccaga gacacaaaactgcaggatctggtgtcatttcttgaaccactacttcggaactctagtgaa catcggcgcaattatatggttatcaaaaacttgattctccgagcaaacttagaggtaaaa gaggatctgtacaagcgacgtcaagctgttgtgaagattgatggagatagcatgtgttct ctttgtcataaacgcattgcaaacagtgcttttgcaatttatccaaatggacagacattg gtgcattttgtatgctttagagaatcacaacagattaaggctgttagaggatcaaactct gggaaacgtagatga

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