Lolium rigidum (rigid ryegrass): 124704113
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Entry
124704113 CDS
T09103
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124704113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124704113
03036 Chromosome and associated proteins [BR:
lrd03036
]
124704113
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124704113
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124704113
PBAF complex
124704113
GBAF(ncBAF) complex
124704113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
124704113
NCBI-ProteinID:
XP_047092309
LinkDB
All DBs
Position
3:complement(357174979..357181008)
Genome browser
AA seq
964 aa
AA seq
DB search
MEPKAPAAPHGDGPPAEAPRRRGGGGKRKAAGSSFTPSKRHAKERNASYNVPQHLLHSGP
LTRAARHSPHKLSGAPPDAAPAATGAGGSGKVEGDAIRLDGEQTPAEEAPLVDEAFEAVR
SRDAGVHVVPTFAGWFSWKDIHPVEKQTLSSFFNGKSEKRTPEIYSGIRNSIVMKFHANP
QLQLESKDLAEISIGEADARQEVFDFLDHWGLINFHPFPPAGIEETKPEESQSDSPNEDK
ASVIEKLFKFEPIQSYMIPLPKKGEVEIPAPLPSFLPDPVLVEDVVAAAEPSVEYHCNSC
SVDCSGKRYHCRTQADFDLCSNCYNEEKFDPGMSKTDFILMDSAEVSGARGTSWTDEETL
LLLEALEIFGGKWAEIAEHVATKTKTQCMLHFLQMQIEDSFHGDEDVHQNIHESKQALVE
KGTPEVPDKMEVEEKIEGKDTEDEKPSEKTEGNNAEAKTEEGTPVEDKDTNNSAGVDSVA
VPNADDPKPSSDADLAKEDPVNPDTSDKNASNVATDASGENASNVATDTSGENASNVATD
ASGENASNDAIDILKSAFEAVGHFPGDEGSFADAGNPVMALAAFLAGLVEDDNATTSCRS
SLKAISEDPPALQLASRHCYILEDPPSDLKDFFVTVSNEIKDGDQAKDEDMIIDSTGTEK
KDINEKEENTLPVEKQNSPSSSPKDHKESDNKNVSCDDEVPSVEPKSSNVKESGDPIPLV
GKSASNDTEGSLSTKDSVAPQDNANGCGLLASQEAVAGSTTVASNPEEDKPSSEVEPDDD
SSANGKIELNKTEDAVGAPTIVQEDEKSQTLGNSKMEELNGAEIVPADAEKGSGVTAKPD
DSLTRLKRAAATAISAAAVKAKLLAEQEEDQIRRLAALVVEKLLQKTEAKMSLFADVEQV
ALRTREYTEKTRKKLLMERNAIIAARMGALPSRPNQHGVAGNRLPPGYGAPAVRPPNAMP
RPSS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaggccccggccgccccgcacggcgacgggccgccggcggaggccccccgc
cgccgcggcggcggcggcaagcgcaaggcggcggggtcgtcgttcacgccgtccaagcgg
cacgccaaggagcgcaacgcctcctacaacgtgccccagcacctgctccacagcgggccg
ctcacccgcgccgcgcgccactcgccgcacaagctctcgggcgcgccgccggatgcggcc
cccgcggcgaccggggccggcggatcggggaaggtcgagggcgacgcgattcggctcgac
ggggagcagacccccgccgaggaagcgccgctggtggacgaggcgttcgaggccgttcga
tcccgcgacgccggcgtccatgtggtccccacctttgccggatggttttcgtggaaggac
atccacccagtcgagaagcaaacattgtcttcgttctttaatggcaaatctgagaagcgg
acaccggagatttactcggggattagaaattccattgtgatgaaatttcatgcaaatcct
cagctgcagctggagtccaaagatttagctgagatatcaattggggaggccgatgctcga
caggaagtgtttgatttcttggatcactggggcctgatcaatttccacccttttccaccc
gctggcatagaggagactaagccagaggagagccaaagtgattctcccaatgaggacaaa
gcgtctgttattgagaagctgtttaaatttgaacctattcagtcatatatgatcccttta
ccaaagaaaggggaggtggaaattccagcccctctgccttcatttcttcctgatcctgta
ctagtggaagatgtggttgcagcagctgagccttctgttgagtaccactgcaactcctgt
tcagttgattgctcaggcaagcgctaccattgccggacccaggcagattttgacctgtgt
tctaactgctacaacgaagaaaaattcgatccaggcatgtccaaaactgatttcatcctt
atggattcggcagaagtttctggtgctcgtggtactagttggactgatgaggagacattg
cttcttttagaagctttggaaatttttggtggaaaatgggctgagattgccgagcatgtt
gctacgaaaacaaaaacacagtgcatgttacactttcttcaaatgcaaattgaggacagc
tttcatggtgatgaagatgttcaccaaaatatccatgaaagcaagcaagccttggtggaa
aaaggcacccctgaagtacctgataaaatggaagttgaagagaaaattgaaggaaaagat
acagaggatgagaagccttcagagaaaacggaaggcaataatgcagaagcaaaaacagaa
gaaggaactcctgtggaagataaagataccaataattcagctggtgtagattcagttgca
gttccaaacgctgatgatccaaaaccatcttctgacgctgatctagcaaaggaagatcct
gttaatcctgatacttctgacaaaaatgcgtcaaatgttgctaccgatgcttctggtgaa
aatgcatcaaacgttgctaccgatacttctggtgaaaatgcatcaaacgttgctaccgat
gcttctggtgaaaatgcatcaaacgatgctattgatatcctgaaatctgcattcgaggcc
gtcggtcacttcccaggagatgaaggttcatttgctgatgcagggaatcctgttatggca
ctggcagcatttttggctggtcttgtcgaagatgacaatgctaccacttcttgccgtagt
tcactaaaagccatatcggaggatcctcctgcactccagttggcaagtagacactgttat
attcttgaagatccaccgagtgatctgaaagacttttttgtcactgtaagtaatgaaatt
aaagatggtgatcaagcaaaagatgaagatatgattatagattcaactggtactgagaaa
aaggatattaatgaaaaggaagaaaatactctgccagtggaaaagcaaaacagtccatcc
agttcaccaaaagatcataaagaatcagataataagaatgtgtcttgcgatgatgaagtt
ccctctgtggagcctaaatccagtaatgttaaggagtcaggtgatccaattcctctggtg
ggtaagagtgcatccaatgacacagaaggttcattaagtacgaaagattcagttgctcca
caagataatgcaaatggatgtggtttgttagcttctcaagaggcagttgcaggaagtact
acagttgcatctaatcctgaagaggacaaaccaagttctgaagtggagccagatgatgat
tcgtctgcaaatggcaagatcgagcttaataagaccgaagatgcagttggtgccccaact
attgtacaagaagacgagaaaagccaaacattggggaatagcaaaatggaagaacttaat
ggtgccgaaatcgtccctgccgatgctgagaagggctcaggagtgaccgccaaacctgat
gattccctaactcggctaaaacgagcagcagcgactgctatttcagctgctgctgtgaag
gctaagctccttgctgagcaggaggaagatcaaattcgaaggctagctgcactggtggtt
gaaaagctgctgcagaagacggaggcgaagatgtcattatttgccgatgtggagcaagtg
gccctccgaacaagagaatacaccgaaaaaaccagaaagaagcttctgatggagaggaac
gctataatcgctgcccgcatgggtgctttgccatctaggccgaaccagcatggtgttgct
gggaacagattgccacctggatatggcgcccctgcagtaagaccaccaaacgcgatgccc
cggcccagcagctga
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