Lolium rigidum (rigid ryegrass): 124704122 Help Entry 124704122         CDS       T09103                                  Name (RefSeq) phytochrome A type 3   KO K12120   phytochrome A Organism lrd  Lolium rigidum (rigid ryegrass) Pathway lrd04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:lrd00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     124704122 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHY PAS PAS_2 GAF PAS_9 HATPase_c PAS_4 HisKA PAS_8 PAS_10 Motif Other DBs NCBI-GeneID:  124704122 NCBI-ProteinID:  XP_047092316 LinkDB All DBs Position 3:357751315..357758162 Genome browser AA seq 1129 aa AA seqDB search MSSSRPASSSSSRNRQSSRARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDAPPVQQ GRSEKVIAYLQHIQKGKVIQTFGCLLVLDEKTFNVIAFSENAPEMLTTVSHAVPSVDDPP RLGIGTNIRSLFSDQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVID FEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMA YKFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVI EAEALPFDISLCGSALRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQ QKKKLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNREFELEKQLREKSILRMQTML SDMLFREASPLTIVSGTPNIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVH RDSTGLSTDSLHDAGYPGASALGDMICGMAVAKINSNDILFWFRSHTAAEIRWGGAKNDP LDMDDSRRMHPRLSFKAFLEVVKMKSLSWTDYEMDAIHSLQLILRGTLNDASKPKRESSL DNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDA IGRHILTLVEESSVPVVQRMLYLALQGKEEKEVRFEVKTHGPKRDDGPVILVVNACASRD LHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPNPLIPPIFGADEFGWCSEWNA AMTKLTGWNRDEVLDKMLLGEVFDSGNASCLLKNKDAFVSLCVLINSALAGEETEKAPFG FFDRSGKYIECLLSANRKENDGGLITGVFCFIHVASHELQHALQVQQASEQTSLKRLKAF SYMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDNITEKS SCLDLEMAEFVLQDVVVAAVSQVLITCQGKGIRVSCNLPERFMKQSVYGDGVRLQQILSD FLFISVKFSPVGGSVEISSKLTKNSIGENLHLIDLELRVKHQGLGVPAELMAQMYEEDNK EQSEEGLCLLVSRNLLRLMNGDVRHLREAGVSTFILTAELASAPTVMGQ NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgtcttcctcaaggcctgcttcaagttcttccagcagaaaccgccagagctcccgggca agggtattagcacaaacaacccttgatgctgaactcaatgctgaatatgaagaatctggt gactccttcgactactccaagctggttgaagcacagagggacgctccacctgtgcagcaa gggcggtcggagaaggtcatagcctacttacagcacattcagaaaggaaaggtaatccaa acatttggttgcctattggtccttgatgagaagaccttcaacgtcatcgcgtttagtgag aacgcaccagaaatgcttactacggtcagccatgcggtacccagtgttgatgacccccca aggctgggtattggcaccaatatacggtcacttttcagtgaccaaggtgccacagcactg cataaggcactagggtttgctgatgtttctttgttgaatcctatcctagtacagtgcaag acctcaggcaagcctttctatgccattgttcatcgagcaactggttgtttggtgatagac tttgagcctgtaaagcctacagaatttcctgccactgctgctggggctttgcagtcttac aagcttgctgccaaggcaatctccaagatccagtcattgccaggtggaagcatggaggtg ctatgcaatactgtggttaaggaagtttttgaccttacagggtatgatagggttatggct tacaagttccatgaagatgaccatggtgaggtctttgccgagatcacaaagcctggtctt gagccttatctaggcctgcactatccagccactgatattcctcaagcagccaggtttctt ttcatgaagaacaaagtacggatgatttgtgattgccgtgcgagatccataaaggtcatc gaagctgaggcactcccctttgatattagcttgtgtggttcagcactcagggcaccacac agttgtcaccttcagtatatggagaacatgaattcgattgcatcccttgtcatggctgtt gtggttaatgagaatgaagaggatgatgaagctgagtctgaacaaccagcgcaacagcag cagaagaagaaactatggggcctccttgtttgccaccatgagagcccaagatatgtccct tttccgctgcgttatgcttgtgagttcttagctcaggtgttcgctgtccatgtcaacagg gagtttgaattagagaaacagttgcgtgagaagagcatactgaggatgcaaacaatgctc tctgatatgctgttcagagaagcctctcccctgactattgtatcagggacacccaatatc atggacctagtcaaatgtgatggtgctgctctcctttatgggggcaaagtatggcgtctg cgtaatgctccaaccgagtctcagatacatgatatagccttctggctatcagatgttcac agggattccactggcctgagtactgacagcctccatgatgctggctatcctggagcttct gctcttggtgatatgatttgtggaatggcagtggctaagatcaactccaacgatattctt ttttggttcaggtcacatacggctgccgaaatcagatggggaggtgcaaagaatgatccg ttggacatggatgacagcagaaggatgcaccctaggttgtctttcaaagccttccttgaa gttgtcaagatgaagagcttgtcttggactgactatgagatggatgctattcattcattg caacttatacttcgagggacactgaatgatgccagcaagccaaagcgggaatctagttta gataaccagattggtgatctaaaacttgatgggcttgctgaactgcaggcggtgaccagt gaaatggttcgtctaatggaaacagcaactgttccaatcttggcagtagatggcaatgga ctggtcaacgggtggaatcagaaagcagcggagttgactgggctaagagttgatgatgca ataggaagacacatacttacacttgtggaggagtcctctgtaccagttgtccagaggatg ctatatctagctctgcagggtaaagaagagaaagaagttcgatttgaggtaaagactcat ggcccgaagagggatgatggtccagttatcttggttgtgaatgcttgtgccagtcgtgac cttcatgatcatgttgttggagtgtgctttgttgcccaggatatgactgtccataagttg gtgatggacaagtttactcgggttgagggtgactacaaggcaatcattcacaacccaaac ccactcattcctcctatatttggtgctgacgaatttggatggtgttctgagtggaatgct gcaatgaccaagctgactgggtggaacagagatgaggtgctcgataagatgcttctcggc gaagtgttcgacagtggcaatgcctcctgccttttgaagaacaaagatgcatttgtaagt ctatgtgttcttatcaacagtgcattagctggcgaagaaacagaaaaggctccattcggc ttcttcgaccgaagcggaaagtacattgagtgtcttctatcagcaaacagaaaagaaaat gacggtggtctcatcactggagtattctgttttattcatgttgctagtcatgagctgcaa catgcactacaggtgcagcaagcctcggagcagacgtcgctaaaaaggctgaaggctttc tcctacatgagacatgcgatcaacaaccctctctcaggcatgctctactctagaaaagca ttgaagaacacagatttgaatgaagaacagatgaagcagatccatgtcggagataattgt caccaccagataaacaagatacttgcagacttggatcaagataacatcaccgaaaaatct agctgtctggatttggagatggctgaatttgtgttgcaagatgtggtggtggctgctgta agtcaagtactgataacctgccagggtaaagggatcagagtctcttgcaacctgccagag agatttatgaagcagtcagtctatggagatggtgttcgactccagcagatcctgtctgac ttcctgtttatttcagtgaagttctctcctgttggaggttctgttgagatttcttccaag ctgacaaagaacagcatcggagaaaatcttcatcttattgaccttgaacttagggtcaag catcagggattaggagtcccagcggagctcatggcacaaatgtatgaggaggataacaag gagcagtcagaggagggcttgtgcctcctagtttctagaaacctattgaggctcatgaat ggcgatgtacgccatctaagggaagctggcgtatcaaccttcatcctcactgctgaactt gcttcggctccaacagtaatgggacaatga

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