Lolium rigidum (rigid ryegrass): 124704270
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Entry
124704270 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124704270
Membrane trafficking [BR:
lrd04131
]
Protein recycling
Others
EARP complex
124704270
Endosome - Golgi transport
Tethering complex
GARP complex
124704270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
EXOC6_Sec15_N
COG5_N
Vps54_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
124704270
NCBI-ProteinID:
XP_047092471
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Position
3:370682843..370694691
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AA seq
766 aa
AA seq
DB search
MATTAGAPPTAMDEKARRTRDLLASFYNTDPAAAGAVPASPARPSPAASSVSPLESINSA
SFNPDVYMDVLVQQSNLEGLLQGHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMK
TNIVGMETNMEQLLGKITSVQSRSDTVNTSLFNKRENIEKLHRTRNLLRKVQFIYDLPTR
LNKCIKAEAYADAVKFFTGAKPIFEAYGDSSFQDCKKASEEAMDIVIQHLQAKLYSDSEP
IEARAEAVVLLKQLNFPVDNLKSSLLEKLEDCLLNFQNKPTNASIGDISKTFRAYLIIFP
DSERRLIELAHALFTNRYETVRETLKERIPSTDLLAILRGLWEDATAIDEVIPEAALPAF
SLETTRDIIKQHIATAFLHLQTEISDVLVRTHSTSNEKLEESQLQTAMEKSKIKVSQGCI
DLLQEFHHLIDGDTELIVKLKDLIIDWVQEGFQDFFQKLDGHFHLLSGRSKSFSQESNSV
DSVQIDKIPTVLVLMLAQLCVFIEQTTIPKVTEDLAASFSGGGARSYEYGPPFVPGEICR
LYRSSGEKFLHHYINMKTQKISKLLNKRFSTPVWIKHKEPREVNMFVDLLLLEFNGVVSE
VKQILPGLIRRHRHSDSTGSTTSSRSNPMREDMLNRSNTTRTRSQFLENHLAKLFEQKME
IFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKSSLKEFIDDEA
AISFLLKEVNNAAHERCLDPIPLEAPILDKLINAKLAKIKEQGPNV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccgccggcgcgccgccgacggcaatggacgagaaggctcggcgcacgcgc
gatctcctggccagtttttacaacaccgaccccgcggccgccggcgctgttcccgcttcc
ccggcgcggccctccccggccgcctcctccgtctcgccgctcgaatccatcaactctgcc
tccttcaaccccgatgtctacatggacgtcctggtgcaacaatcaaacttggaaggcctt
ctgcaggggcatgtgaaaatggctgccgagatcaagaacctggacacagacttacagatg
ctagtatacgagaactataacaagtttataagtgcaactgacactataaaaaggatgaag
actaacattgttggtatggagacaaacatggaacaactacttggaaagataacatcagtg
caatcaagaagtgatacagtgaacacatctcttttcaacaaaagggaaaacatagagaaa
ttacaccgtacacgcaatcttctccggaaagttcaattcatatatgatttgccaactcgg
ctgaacaaatgtatcaaggcagaagcatatgcggatgctgtcaaattttttactggagca
aaacctatttttgaggcctacggtgattcatcctttcaagattgtaaaaaggcatccgag
gaggctatggatatagttatacaacaccttcaggcaaagttgtactcagattctgaacct
attgaagcaagagcagaagctgtggtgcttcttaaacaacttaattttcctgtggacaac
ctaaaatcaagcctacttgagaaactcgaagattgccttctaaatttccagaacaagccc
acaaatgcttcaattggtgatatttccaagacattccgtgcttatctcataatatttcct
gattcagaaagacgtctcattgaacttgctcatgctttgttcacaaaccgctatgaaaca
gtcagagagactctgaaggaaagaattccatcaacagatctgttggcaattctacgaggc
ttatgggaggacgcaactgccatcgacgaagttataccagaggcagcgctgccagctttt
tccttggagactactcgagacattattaagcaacacatagcaactgcctttcttcatctt
caaactgaaatatcagatgtactggtcagaacacactcaacatcaaacgagaagttggaa
gagtcacagctgcaaactgccatggaaaaaagcaaaattaaagtatcccaagggtgcata
gatctcctgcaggaattccatcaccttatagatggcgatacagagttgatagtaaagctg
aaagatttgattattgattgggtacaagaaggttttcaagatttctttcagaaacttgat
ggacattttcatctgctttctgggagaagcaagagtttctctcaagagtcaaattctgta
gattctgtgcaaatcgacaagattccaacagtgttggtgcttatgcttgcacagctttgt
gttttcatagaacagacaacaattcctaaagtgacggaggatttggctgcttctttctct
ggaggtggggcacgcagctatgaatatggaccaccttttgtacccggggagatatgtcgg
ctatatcgctcatctggggagaaatttttgcaccattacataaatatgaagactcagaag
atctccaaacttcttaataagcgattttcaacaccggtctggataaagcacaaggaacca
cgggaagttaacatgtttgttgatctacttctcctagagttcaatggtgtagtatctgaa
gtcaagcagatcttgcctggtttaattcgacgacatcggcattctgatagcactggcagc
accacttcctcaagaagcaatccaatgcgagaggacatgttgaaccgatcaaacacaaca
cgtactagaagtcagtttctagaaaatcatctagcaaaattattcgaacagaaaatggaa
atattcacgaaagttgaatacacacaggagtctgtaatttctgccgtcctgaagctttgc
ctgaaaagtttgcaagaatttgtccggcttcagactttcaacagaagtggatttcagcag
attcagttggatatggaatttctgaagagctcccttaaggagtttattgatgatgaagca
gctataagcttcttacttaaagaggtgaacaatgctgcacacgaaagatgtcttgaccca
atacctctcgaggccccaatactagataagctcataaatgcaaaactagcaaaaattaaa
gagcaaggcccaaatgtatag
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