KEGG   Lolium rigidum (rigid ryegrass): 124704501
Entry
124704501         CDS       T09103                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03420  Nucleotide excision repair
lrd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124704501
  09124 Replication and repair
   03420 Nucleotide excision repair
    124704501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124704501
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124704501
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lrd04147]
    124704501
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124704501
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124704501
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124704501
Exosome [BR:lrd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124704501
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Pox_VLTF3
Other DBs
NCBI-GeneID: 124704501
NCBI-ProteinID: XP_047092717
LinkDB
Position
3:complement(389831356..389842208)
AA seq 822 aa
MSHPHATAPKRPFSSSSSPAPPHMKKAKLPASSSSSSSAPAEKNGLHLDPTAAARGTNGG
EDADMLLADQDELRSPGASTPGGGTANLFRKKATLPQPSAAGATRKPLRIKIGQPKLPKN
FEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERVKKECEIHIAEK
ISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNIPNLSSVWDMGLQL
FRKHISLSPEIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSETFEKPFLE
CTSQFYATEGVKYLQQSDIPDYLKHAESRLQEEHERCILYLEANTRKPLIATTEKQLLQR
HTSAIIEKGFTMLMEANRVTDLSRMYILFQRVDAIEMLKQALSLYIRGTGQGVIMDEEKD
KDLVPFLLDFKASLDKILEESFAKNEAFSNTIKESFEHLINLRQNRPAELIAKFLDEKLR
PGNKGTSEEELEGILDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITK
LKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQARTKLPTGIELSVHVLTTGYWPTYP
PMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELAVSLFQSV
VLMLFNDAQKLSFIDIKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFN
DDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLIT
ELFQQLKFPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgtctcacccccacgccaccgcccccaagcggcccttctcctcctcctcctcccccgcg
ccgccgcacatgaagaaggccaagctccccgcctcctcctcctcctcctcttctgccccc
gccgagaagaacgggctccacctcgatccgaccgccgccgcccggggcaccaacggcggg
gaggatgcggacatgctgctcgccgaccaggacgagctccgctcccccggcgcctccacc
cccgggggcggcacggccaacctcttccggaagaaggccacgctcccgcagccctccgcc
gccggcgccacgcgcaagcccctccgcatcaaaataggtcagcccaaattgccgaaaaac
tttgaggaggatacttgggcaattttgaaggatgccattacagccatatttctcaagcag
aagctttcttgtgacgttgagaaactttatcaggctgccggtgatctatgtctacacaag
ctaggggcaaatttatatgaacgcgtgaagaaagaatgtgaaatacatatagcggaaaaa
atatcagcattagtgggccaaagtccagatttggttgtatttttgtcattggtgcaaaga
acatggcaagatttttgcgatcaaatgttgattattcgtggtattgctttacttcttgat
gtaaaatatgtcaagaatatcccaaatctatcttcagtgtgggatatggggctgcagctg
ttccgcaagcatatatcactgtctccggagattgaacacaaaaccgtcactggtctttta
agattgatagagagcgagaggcttggtgaagcaatagataagacattgcttagtcatctt
ctgaagatgtttactgatcttggaatgtattccgagactttcgaaaagcctttccttgaa
tgcacttctcagttttatgctaccgaaggtgtcaaatatttgcaacagtctgacattcca
gattatctgaagcatgcagagtcaaggttgcaagaagaacacgaaaggtgcattctgtat
ctggaagctaacacgaggaagccacttatagcaactacagaaaagcaattgctacagcga
cacacatctgcgattattgagaagggatttacaatgcttatggaagcaaatcgtgtaacg
gacctctcgaggatgtacatccttttccagagggttgatgccattgagatgctaaagcaa
gcgcttagtttatatatccgtggcacaggccagggcgttatcatggatgaagaaaaagac
aaagatttggttccgtttctcctggattttaaggcatctcttgataaaatattggaagaa
agttttgccaaaaacgaggctttctccaataccataaaggagtccttcgagcatcttatc
aacctacgccagaaccgtcctgctgaattgatcgcaaagtttcttgatgagaaacttcga
cctggaaataaaggaacttcagaagaagaactggagggaatacttgacaaagttttggtt
ctgttccgatatatacaaggaaaagatgtatttgaggcattctacaagaaggatctggct
aagaggttgctactgggaaagagcgcatcaatagatgctgaaaaatcaatgattacaaag
cttaaaactgagtgtggaagtcaatttaccaacaaactggagggaatgttcaaggacatt
gaattatccaaagaaataaatgattctttcaagcaatcatctcaggcaaggacaaagctt
ccaactggcattgaattaagtgtccatgtgcttacaacaggctactggccgacatatcca
ccaatggatgtaaaactcccacatgaacttaatgtctaccaggatatatttaaagagttc
tatttgagtaagtacagtggaaggcgtctgatgtggcaaaattcgttgggtcactgtgtc
ttaaaagcagagttccctaaaggtagaaaggagcttgcagtgtcattgttccagagtgtg
gttttgatgttgttcaacgatgcacaaaagctaagcttcatcgacataaaagagtcaact
ggtattgaggataaagaactgagaaggacactgcagtcacttgcatgtggtaaagttagg
gttctccaaaagacgccaaaaggacgagatatagatgataaagacgaatttgtatttaat
gatgacttcagtgcccccctctaccgcataaaggtgaatgcaattcagatgaaagagacg
gtagaagaaaacacgagcaccacagagagagtatttcaagatcgtcagtatcaggttgat
gcagccatagttcgtattatgaagacaaggaaaaccctcagccacacccttctaataact
gagcttttccagcagctcaagttcccgattaagccagcggatatgaagaagagaatagag
agcctaatcgacagggagtacctggagagagaccgaagtaacccccagatatacaattat
cttgcttga

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