Lolium rigidum (rigid ryegrass): 124704518
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Entry
124704518 CDS
T09103
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124704518
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
General mRNP proteins
124704518
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
124704518
NCBI-ProteinID:
XP_047092740
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All DBs
Position
3:390752544..390761044
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AA seq
581 aa
AA seq
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MDFDEYDYLEKAVEPPVPSTNGAGEKDRSSRRRSSAGGGRDLEERGSKRPRSGEDRERHR
SGREHRDREDGKVGMKDEGRDRERVREKDGGHSREKVREKDESRDPEKIREKDASRDREK
VREKDGSRDREKVWEKEREGRDRLMERELGRERRSRSRSERRRGEEEEMVRELQRERDRS
DRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVR
LIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQGVMVKPSEAEKNLAQSNATSGG
AASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLED
AKAAQSLNGQLDIAGRVIKVSAVTDQGGMQLGGTTTGDLDDDEGGGLALNASSRALLMRK
LDRSGSTTSLTGGIVAPGLNTSVGLPAASMFGAPMAAASLIQPVGVVPGAPLPIISQSAD
IGMPTEFLLLKNMFDPAVETDPDFDLDIRDDVQDECSKFGVVKHIVVDKHTAGFVYLHFD
SATAAASAQRSLHGRWFAGKMITATFMTAQQYEMKFPDRQV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgactacttggagaaggcagtcgagccccctgtcccttcaacc
aacggcgcgggcgagaaggaccgcagctcgcgccgccgctcctccgccggcggcggccgc
gacctagaagagcgcggatcgaagcgtcctcgctcgggagaagaccgtgagcggcaccgc
agcggccgcgagcaccgcgaccgggaagacgggaaggttggtatgaaagatgagggccgc
gaccgcgagagagttagggagaaggatgggggacacagccgggagaaggttagggagaag
gatgagagccgcgaccctgaaaagattagggagaaggacgcgagccgggaccgagagaag
gttagggagaaggatggcagccgtgaccgagagaaggtctgggaaaaggagcgggagggc
agggacaggcttatggagagggagctcgggagggagcggaggagccgtagccgctcagag
cgtcgccgcggagaggaggaggagatggtgagggagctccagcgggagcgtgaccgtagt
gaccgccaccgtgactaccgggaccgcgatttcaggcgtaagaaagatgatggtacagaa
ccagaagttgacccagaaagagatcaaaggactgtatttgccttccagctatctttgaag
gcagatgaaagggatgtctatgagttcttctcaagagcagggaaggttcgtgatgttcgc
cttattatggaccgaaactcacggcgttccaaaggagttgggtacatcgaattctatgac
gttatgtctgttccgatggcgattgctctaactggtcagccacttcttgggcaaggagtg
atggttaagccatcagaggctgaaaagaacttagctcagtcaaacgcgacatcaggtgga
gcagcttcaggtggagcaagaaagttgtatgttggcaaccttcattccaatatcacagag
gaccaactgagacaggtcttcgaaccatttggtcaagttgagcttgtccagcttcctgta
gatccacttactggactatgcaaaggttttggtttcattcagtttgcacggcttgaagat
gcaaaagctgcccagagtttaaatggccaactagatattgctgggagagtaattaaggtc
tcggctgttactgatcagggcggtatgcaacttggtggcacaactactggagatctagat
gatgatgaaggtggaggcttggcattaaatgcaagctctagagcccttcttatgcgtaaa
ttggaccggagtggctccacaaccagcttaactggtggcattgttgctcctggtttgaac
acatctgttggattgccagctgcatctatgtttggtgctcctatggcagctgcttctctt
atccaacctgttggagtagttccaggagcacctcttcctattatttcccaatctgctgat
attgggatgcctactgaattcctattgctgaagaacatgtttgacccagcagtggagact
gatcctgattttgatttggatattagagatgatgtgcaagatgaatgttcaaagtttggt
gtagtgaagcatattgttgttgataagcatactgccggttttgtgtacctgcattttgat
agtgcaacagcggctgcaagtgcacaacgatcacttcatggcagatggtttgcagggaag
atgattacagcaacatttatgaccgcccagcagtatgaaatgaagttcccagaccgacaa
gtgtga
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