Lolium rigidum (rigid ryegrass): 124704606
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Entry
124704606 CDS
T09103
Name
(RefSeq) squalene synthase 8-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00100
Steroid biosynthesis
lrd00909
Sesquiterpenoid and triterpenoid biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124704606
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
124704606
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrd01006
]
124704606
Enzymes [BR:
lrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
124704606
Prenyltransferases [BR:
lrd01006
]
Terpene biosynthesis
Squalene/phytoene synthase
124704606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
YxiJ
PhoU_div
Motif
Other DBs
NCBI-GeneID:
124704606
NCBI-ProteinID:
XP_047092834
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All DBs
Position
3:complement(400013399..400019936)
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AA seq
436 aa
AA seq
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MGALSRPEEVVALVKLRVAAGQIKRQIPPQEHWAFCYDMLQKVSRSFALVIQQLGPELRN
AVSTLFPPFPTRQTNSLRFETPDLDCNAAAHVVQVCIFYLVLRALDTVEDDTSVANEVKL
PILVDFYQHIYNPAWHFSCGTNHYKVLMDNFRLLSTAFLELGQGYQKAIEEITRRMGAGM
AKFICQEVETVEDYNEYCHYVAGLVGYGLSRLFHAAGTEDLASDQLSNSMGLFLQKTNII
RDYLEDINEIPKCRMFWPREIWSKYADKLEDLKYKENSEKAVQCLNDMVTNALIHAEDCL
QYMSALKDNTNFRFCAIPQIMAIGTCAICYNNVNVFRGVVKMRRGLTARIIDETKSMSDV
YSAFYEFSSLIESKIDDNDPSSALTRKRVEAIKKTCKSSGLLKRRGYDLEKSQYRHMLIM
LALLLVAIFLGVLYAK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgtcgcggccggaggaggtggtggcgctggtgaagctgcgcgtggcggcg
gggcagatcaagcgccagatcccgccccaggagcactgggccttctgctacgacatgcta
cagaaggtctcccgcagcttcgcgctcgtcatccagcagctcggacccgaactgcgcaat
gccgtaagcactctcttcccccccttccccacccgacagacaaattcgctccgattcgag
acacccgatttggactgtaacgcggccgctcatgttgtgcaggtctgcatcttctacctc
gtgctccgggccctcgacacagtcgaggacgacaccagcgtcgctaacgaggtgaagctg
cccatcctcgtggatttctaccaacacatctacaaccccgcctggcatttttcatgtggc
acaaaccactacaaagtgctcatggataacttcaggctcctctccacggcattcctcgag
ctgggtcaaggatatcaaaaggcaattgaagagatcactaggcgaatgggagcaggaatg
gcaaaatttatatgccaggaggttgaaactgttgaagactataatgagtactgccactat
gtagcagggctagtaggctatgggctttccaggctgtttcatgctgctgggacagaagac
ctggcttcagatcaactttcaaattcaatgggtttgtttctgcagaaaaccaatataata
agggattatttggaggacataaatgagataccaaagtgccgtatgttctggcctcgagaa
atatggagtaaatatgcggataaacttgaggacctcaagtataaggaaaattcagaaaaa
gcagtacagtgcttgaatgatatggtgactaatgctttgatccatgctgaagattgcctc
caatacatgtcagcgttgaaggataataccaattttcggttctgtgcaatacctcagata
atggcaattgggacatgtgctatttgctataataatgtgaatgtcttcagaggagtcgtt
aaaatgaggcgtgggctcactgcacgaataattgatgagacaaaatcaatgtcagatgtc
tattctgctttctatgagttctcttcattgatagagtcgaagattgatgataacgaccca
agttctgcgctaacacggaagcgtgtagaggcaataaagaaaacttgcaagtcatctggt
ttactaaagagaaggggatacgacctggaaaagtcacagtataggcatatgctgatcatg
cttgcacttctgttggtggctatcttcttgggtgtgctgtatgccaagtga
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