Lolium rigidum (rigid ryegrass): 124704619
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Entry
124704619 CDS
T09103
Name
(RefSeq) squalene synthase 1-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00100
Steroid biosynthesis
lrd00909
Sesquiterpenoid and triterpenoid biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
124704619
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
124704619
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrd01006
]
124704619
Enzymes [BR:
lrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
124704619
Prenyltransferases [BR:
lrd01006
]
Terpene biosynthesis
Squalene/phytoene synthase
124704619
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
Motif
Other DBs
NCBI-GeneID:
124704619
NCBI-ProteinID:
XP_047092846
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Position
3:400962687..400968533
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AA seq
403 aa
AA seq
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MGALSRPEEVVALVKLRVAAGQIKRQIPPEEHWAFCYDMLQKVSRSFALVIQQLGPELRN
AVCIFYLVLRALDTVEDDTSVANDVKLPILVDFYQHIYNPNWRFSCGTNHYKVLMDNFRL
LSTAFLELGQGYQKAIEEITRRMGAGMAKFICQEVETVEDYNEYCHYVAGLVGYGLSRLF
HAAGTEDLASDELSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYADKLEDLK
YKENSEKAVQCLNDMVTNALIHAEDCLQYMSALKDNTNFRFCAIPQIMAIGTCAICYNNV
NVFRGVVKMRRGLTARIIDETKSMSDVYSAFYEFSSLIESKIDDHDPSSALTRKRVEAIK
KTCKSSGLLKRRGYDLEKSRYRHMLIILALLLVAIFLGVLYAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgtcgcggccggaggaggtggtggcgctggtcaagctgcgcgtcgcggcg
gggcagatcaagcgccagatcccgcccgaggagcactgggccttctgctacgacatgctg
cagaaggtctcccgcagcttcgcgctcgtcatccagcagctcggaccagaactacgcaat
gccgtctgcatcttctacctcgtgctccgggccctcgacacagtcgaggacgacaccagc
gtcgctaacgacgtcaagctgcccatcctcgtcgatttctaccaacacatctacaacccc
aactggcgtttttcatgtggcacaaaccactacaaagtgctcatggataacttcaggctt
ctctccacggccttcctcgaactgggtcaaggatatcaaaaggcaattgaagagatcact
aggcgaatgggagcagggatggcaaaatttatatgccaggaggttgaaactgttgaagac
tataatgagtactgccactatgtagcagggctagtaggctatgggctttccaggctgttt
catgctgctgggacagaagacctggcttcagatgaactttcaaattcaatgggtttgttt
ctgcagaaaaccaatataataagggattatttggaggacataaatgagataccaaagtgc
cgtatgttctggcctcgagaaatatggagtaaatatgcggataaacttgaggacctcaag
tataaggaaaattcagaaaaagcagtacagtgcttgaatgatatggtgactaatgctttg
atccatgctgaagattgcctccaatacatgtcagcgttgaaggataataccaattttcgg
ttttgtgcaatacctcagataatggcaattgggacatgtgctatttgctacaataatgta
aatgtcttcagaggagttgttaaaatgaggcgtgggctcactgcacgaataattgatgag
acaaaatcgatgtcagatgtctattctgctttctatgaattctcttcattgatagagtcg
aagattgatgatcatgacccaagttctgcgctaacacggaagcgtgtagaggcaataaag
aaaacttgcaagtcatccggtttattaaagagaaggggatacgacctggaaaagtcacgg
tataggcatatgctgatcattcttgcacttctgttggtggctattttcttgggtgtgctg
tatgccaagtga
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