Lolium rigidum (rigid ryegrass): 124704662
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Entry
124704662 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124704662
04121 Ubiquitin system [BR:
lrd04121
]
124704662
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124704662
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124704662
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124704662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_10
DUF7129
HypA
zf-RING_5
zf-C3HC4_3
DUF1272
Motif
Other DBs
NCBI-GeneID:
124704662
NCBI-ProteinID:
XP_047092887
LinkDB
All DBs
Position
3:405763516..405765966
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AA seq
392 aa
AA seq
DB search
MEEAQETRYWCHNCEEVVVPVEPEKKCPDCDGGFVEEMGSEDFEPSMNVRSEQNLSLWAP
LLLGMMGGSSRRSRPRRDMMDSSSDEEEGRQARIRRALRDTDDEDEEEDDDDSDRELQDL
IRRRRRRGSSLVRLLQTLRDDLRGLDDIGRDRDRGLEGLRERRERERARRDRERERERAR
ERDRGRERTESVILINSNNEAIILQGTFGPNGNQEHSSNTNTGVSLGDYFLGPGLDLLLQ
RLADSDLNRSGTPPAKKESVAALPTVNIQEVLGCTVCLEEFEMGTEAKEMPCQHKFHTSC
ILPWLELHSSCPVCRFQLPTEESKNPCESGSGGGTVSADGDDAESSSSDVEGTDHNGGSQ
PGSPIFPENVSDSDIRSALDALFPNHSSSSES
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctcaggaaaccaggtactggtgccacaactgcgaggaagtggtcgtcccc
gtggagccggagaagaagtgccccgactgtgacggcgggttcgtggaagagatggggtcc
gaggactttgagccgtcgatgaacgtgaggtctgagcagaacctctcgctctgggccccg
ctgctgcttgggatgatgggtggttcgtcgcggcgatcaaggccacgcagggatatgatg
gattcttcctctgatgaggaggagggacggcaagcaaggatccgcagggccttgagggat
actgatgacgaggacgaagaggaggatgacgatgattcggaccgtgagcttcaagacttg
attaggaggcggaggaggaggggctcgtcgcttgttaggctgcttcagaccctccgtgat
gacttgaggggtttggatgacattggcagggacagggacagaggcctggagggcctgaga
gaaagaagggagagggagagggctagaagagacagggagagagaaagggagagggcgagg
gagagagatcgagggagagaaaggacggaaagcgtgatactgatcaactccaacaatgag
gccattattctccagggaacatttggacctaatggcaaccaagagcactcaagcaacacc
aatacaggcgtttcacttggagactactttcttggtcctggcctagatctcctcttgcag
cgtttggcagatagtgacctgaatcgttctggcacacctcctgctaagaaggaatcagtg
gccgcattgccaactgtgaacatccaggaagtattgggctgtacagtctgtcttgaggag
tttgaaatggggacagaagcaaaggagatgccctgtcaacacaagtttcacaccagttgc
atccttccatggctggagctccatagttcttgtccagtttgtcgctttcagttgcctacc
gaggaatcaaagaacccatgcgaatcaggcagcggtggtgggacggtgagtgctgatgga
gatgatgccgagtcaagtagtagtgatgtagaaggtactgaccataatggaggcagccag
cctgggagtcctatatttccagaaaatgtgtctgatagtgatatacgctctgctttggat
gcgctcttcccaaatcattcgtcatcttccgagagctga
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