Lolium rigidum (rigid ryegrass): 124704687
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Entry
124704687 CDS
T09103
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124704687
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124704687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124704687
04131 Membrane trafficking [BR:
lrd04131
]
124704687
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124704687
Membrane trafficking [BR:
lrd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124704687
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124704687
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
124704687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
SsgA
Motif
Other DBs
NCBI-GeneID:
124704687
NCBI-ProteinID:
XP_047092915
LinkDB
All DBs
Position
3:408351048..408353558
Genome browser
AA seq
320 aa
AA seq
DB search
MSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITSIGGASAPSQLLATLTGHYGPV
WRVGWAHPKYGSILASCGYDGRVIVWKEATTGQWSQAHVFGNHKSSVNSIAWAPYELGLS
LACGSSDGTISVMSMRPDGGWDAATIERAHPVGVTAVSWAPAAALGSMVGSDQLVHKLVS
GGFDSVVKVWEFVNGGWKLESALVSDMHTECVRDVSWAPVLGLAKSTIASASQDGKVVIW
TKGKGGSDKWEGKVMRDFEAPVWRVSWSLTGDMLSVAAGEGDITLWKEASDGQWESLWTK
GSDEPQEQETEQAAAEVAAQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaagaagatagagctagaccacaaggacatggttcatgattctgccattgac
tactacgggaagcgccttgccacagcctcctcagactccaccgtgaagatcaccagcatt
ggaggtgcatctgccccatcccagctccttgcgaccctcactggccactacggtcctgtg
tggcgtgttggatgggcccatcccaagtacggttcaatcctcgcatcctgtggctatgat
ggccgtgtgatagtctggaaggaggccacaactgggcaatggtctcaggcccatgtgttt
ggcaaccacaagtcttcagttaactccattgcctgggctccgtatgaactcggcctttcc
cttgcctgcgggtcctccgacggcaccatctctgtcatgtccatgcggcctgacggagga
tgggatgccgcaaccatcgagcgggcacaccctgttggcgtcacagcggtctcctgggct
ccagcagcagcacttgggtccatggtcggctcagaccagctcgtccacaagctcgtgtcc
ggtggcttcgactctgtcgtcaaggtgtgggagtttgtcaacggtggctggaagctggag
agcgccctggtctccgacatgcacacagagtgcgtgagagatgtctcgtgggcgccggtc
ctgggcctggcaaagtccaccatcgccagcgcctcccaggacggcaaggtcgtcatctgg
accaagggcaaaggaggaagcgacaagtgggaaggcaaggtgatgcgtgacttcgaggct
ccggtgtggagggtgtcctggtccctgacgggagacatgctgtccgtcgccgccggcgag
ggcgacatcacgctgtggaaggaggcgtcggacgggcagtgggagtcgctgtggaccaag
gggtcggatgagccgcaggagcaggagaccgagcaggcggcagcggaggttgctgcgcag
tag
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integrated database retrieval system
