Lolium rigidum (rigid ryegrass): 124705318
Help
Entry
124705318 CDS
T09103
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124705318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124705318
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124705318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
124705318
NCBI-ProteinID:
XP_047093015
LinkDB
All DBs
Position
4:276169315..276175433
Genome browser
AA seq
1236 aa
AA seq
DB search
MNEVVSGNAPEVSPLGNQVGRLGVRPDADEEFVDEEGTENHQNTELIPTAASEDEYDEEM
LEERLVADLIRAYSNGGNPDANGGDPDASGADSEAEDEMGFTDDGGDDPSMHDPEECGVS
EPTHGNAKVGMQDLVQHNVVDEPRCHDDEEEDVVKNEVEAQREVATCFKQGDSHIEILDS
DEEVKLLDGAGDSFKRKPPLRQAKAPVVPCVAWRTRSSWGDRVSYNAYFEELSDEPKEED
DDDTEVELDDEEDGDDDGDNSASCDDEEEKEEAQEAEEAENRKRKREIYSSYRGIRAGPL
PLYISGGKRIQESTLKRYSNSKARTRPKTHRRTNSSDDEIIDDTVAHGFEWEVDEHPGIQ
PLDFDEDDSARTAWNDKPTYQQKQSQFTWDLERRKRLKLEGTKKERKLFERHLDSDSNSS
GSGQNKKHGGDSNSGRKKKHLSTKSGKKSSSSVMLKRQSLLKLLMDKMSSDKDGEFPPFY
QHPHFDHNFKDSQPLVFSFGDEDPIPADSSDQNAELDPLWAEFDFALESENIGTYYDDEH
QGERNMLDLGLASTTPCSRGKHEFIIDDQIGIRCKYCSLVNLEIRFVLPSMVSNYAEKPE
WRNGSFLKDALMYHDLCEQAASVDGKLQDFHLYGTVWDLIPGAITTLYHHQREAIEFMWS
NLVGDIRLDELKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFPDCRPVIIAPRG
MLFAWEEEFKKWDVNVPFHIMNTTEYSGKEDRDICSLIKKKHRTEKLTRLVKLLSWNKGH
GILGISYGLYMKLTSEKAGGTGENKVRSILLDNPGLLVLDEGHTPRNERSVMWKTLGKVK
TEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTKTKAGRRHNASKKPRDKFSDKYEK
GVWASLTSNVADDNAEKVRSILKPFVHIHNGTILRTLPGLRESVIVLKPPPLQKSIIRKV
ENVGSGNNFEHEYVVSLASTHPSLVTAINMSEEDASLIDKPMLERIRSNPYEGVKTRFVI
EVVRLCEALKEKVLIFSQFIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYRQTSIEV
FNNPDSDARVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYT
YNLITYGTGEGDKYDRQAEKDHLSKLVFSAEDEFDNVRNMLSKAEMDQCSKLISQDKVLQ
EMASHDQLKGMFLKIHYPPTESNMVFTYNQISPEVI
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggtggtgtcaggcaatgcacctgaagtgagcccccttggcaaccaggtgggc
aggctaggtgttcgtcctgatgcagatgaggagttcgtggatgaagagggtacggagaac
catcagaacacggagttgataccgactgcagcatctgaggacgaatatgacgaggagatg
ctggaggagaggctggtcgcggatctgatccgtgcgtacagcaacggcggcaatccggat
gcgaatggtggtgatccggatgcgagtggagcggactcggaggcagaggatgagatgggg
ttcactgacgatggcggcgatgacccttctatgcatgatccagaggaatgcggcgtgtcc
gagccaacgcacggcaatgccaaggtggggatgcaggatttggtacagcataacgttgtt
gacgaacctaggtgccatgatgatgaggaggaagatgttgtgaagaacgaggtggaggca
caaagagaagtagctacatgctttaaacaaggagattcacatatcgagattcttgattcc
gacgaggaggtgaaactgctcgatggtgccggcgattccttcaagaggaagccgccgctg
cggcaagcaaaggcaccggtcgtgccgtgtgttgcatggaggactcggtcgtcgtggggg
gacagggtgtcgtacaacgcgtactttgaggaactgtccgatgagccgaaagaggaggac
gatgatgatacggaggtggagctggatgatgaggaggacggcgacgacgacggtgacaat
agcgccagttgtgatgatgaggaggaaaaagaggaagcacaagaggcagaagaggctgaa
aacagaaagcgcaagagagaaatttactcgtcttatcgaggaataagggcaggacctttg
ccactttatatcagtggcggtaagagaattcaagagtcaaccctgaaacggtacagcaac
tcgaaggcgcggacgcggccgaaaacccaccgcagaactaactcatctgatgatgaaata
attgatgatactgtagcacatggtttcgagtgggaggttgatgaacatccagggattcaa
ccgcttgactttgatgaagatgacagtgcgcgtacagcgtggaatgacaaacctacgtat
caacagaagcagtcacagtttacctgggatcttgagaggaggaaaaggctgaagcttgag
ggaactaagaaggaacgtaaattgtttgagcggcacttggactcggattccaactcatcg
ggttctggtcagaataaaaagcatggtggtgatagcaatagtgggagaaagaagaagcat
ctgtcaacaaaatctggcaagaaatccagcagttcagtcatgctaaagcggcagtctctt
ctgaagcttctgatggataagatgagtagtgataaagatggagaattccctcctttttac
cagcatcctcatttcgatcataatttcaaggactcccagccattggtattctcatttggg
gatgaagatcctataccagctgacagctcagatcaaaatgctgaacttgatccgctatgg
gctgaatttgactttgctctagagtcagagaatattggaacttattatgatgacgagcat
caaggagagagaaatatgttagatcttggacttgcttctacaacaccttgttctcgaggg
aagcatgaatttattattgatgatcagataggaatcagatgcaaatactgctccttggta
aatctggaaatcagatttgttttaccgtcaatggtctcaaattatgcagagaaacctgaa
tggcgaaatggatcttttttgaaggatgcattgatgtatcatgatctttgtgaacaagca
gcaagtgttgacgggaaactgcaagatttccatctctatggaacagtgtgggatctcatt
cctggtgccattactacattgtatcaccatcaacgtgaagcaattgaatttatgtggtca
aatctagtcggtgatattaggcttgatgagctgaagcatggggctaaacctgatgttgtt
ggaggatgtgtgatctgtcatgccccagggacaggaaagacacgtttagctattgtgttt
atccagacatatatgaaggtatttccagactgtcggccggtgatcatcgcacctcgtggg
atgttgtttgcttgggaagaggagttcaagaaatgggatgtcaatgttcctttccatata
atgaacactacagagtactcagggaaagaagacagagacatatgtagcttaataaagaag
aagcatcggacagaaaaattgacaaggcttgtaaaacttctttcatggaacaagggtcat
ggtattcttggaataagttatggcctatatatgaaactaacatctgaaaaggctggcggc
actggagaaaacaaagtaagaagcattcttcttgacaatcctggtttgcttgtcctggat
gaagggcacacacctaggaatgaacgcagtgtgatgtggaagacgttgggaaaagttaaa
actgagaagcgcattattctatctggaactccgttccaaaacaattttcttgagctctac
aatatactttgtttggtaaggcccaggtttggtgagatgtttttgactaaaacaaaagcg
ggtagaaggcacaatgcctcaaagaagccccgggataaattttctgataaatatgaaaaa
ggagtttgggcttcattaactagtaatgtagctgatgacaatgctgagaaagtaagatca
atattgaagccattcgtccatatccataatggcaccattcttcgaacacttccagggctt
agagagagtgttattgtattgaaacctcctccccttcagaagagcatcattagaaaagtg
gaaaatgttggttctggtaataattttgagcatgaatatgttgtttctttagcctccaca
catccttctcttgtaactgccatcaatatgtctgaagaggacgcttcacttattgataaa
cctatgcttgagaggataaggtcaaatccctacgaaggggtgaaaacaagatttgtaatt
gaagttgttcggttgtgtgaagcactgaaagaaaaggtattgatctttagtcaatttatt
cagccattagaactgatcaaagaacatctgcgcaagtttttcaaatggagagaagggaaa
gagattctccagatggacggaaagatccttccaagataccgtcagacttcaattgaagtt
ttcaataatccagatagtgatgcgagggtgttacttgcatctacaagagcttgttgtgaa
ggaattagcctaacaggagcttcaagagttgtgcttctagatgttgtctggaatcctgca
gttggaaggcaagctatcagcagggcatttaggataggacagaagaaatttgtgtacaca
tacaatttaataacttatggaacaggtgaaggtgacaaatatgacaggcaagcagagaag
gatcacttgtccaagttggtcttctctgcagaagatgagttcgataatgtcaggaacatg
ctatcaaaagctgaaatggatcaatgttctaagttaatttcccaggataaggttctgcag
gagatggcttcacatgaccaactaaaaggcatgttcttaaagatacactatccaccaact
gaatcaaacatggtttttacttacaaccagatttcccctgaggtgatttaa
DBGET
integrated database retrieval system
