Lolium rigidum (rigid ryegrass): 124705371 Help Entry 124705371         CDS       T09103                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism lrd  Lolium rigidum (rigid ryegrass) Pathway lrd03040   Spliceosome lrd04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lrd00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     124705371   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     124705371  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:lrd03041]     124705371    04121 Ubiquitin system [BR:lrd04121]     124705371    03400 DNA repair and recombination proteins [BR:lrd03400]     124705371 Enzymes [BR:lrd01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      124705371 Spliceosome [BR:lrd03041]  Complex B   Other components    Prp19 complex     124705371  Complex C    Prp19-CDC5 complex     124705371 Ubiquitin system [BR:lrd04121]  Ubiquitin ligases (E3)   U-box type E3    124705371 DNA repair and recombination proteins [BR:lrd03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     124705371 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_SPT8 eIF2A Beta-prop_DCAF4 NBCH_WD40 PEP5_VPS11_N zf-Nse U-box KNTC1_N Beta-prop_NWD2_C PAS_11 PUMA_CC Motif Other DBs NCBI-GeneID:  124705371 NCBI-ProteinID:  XP_047093059 LinkDB All DBs Position 4:complement(118242673..118249864) Genome browser AA seq 527 aa AA seqDB search MICAISGEVPDEPVVSKRSGLLFERRLIERYIEDHGKCPVTKDDLSMDDIVLVKTNKVVK PRPLQAASVPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDESRALLALAERQIPASMAGATPAAAVSNGKRAMEEEIGPDGKKIRPGINPVMIDELT ECNTMLSAQRKKRQVPPSLAPIDALERYTQISSHPLHKTNKPGILSMDMHPSKDIIATGG IDTNAVLFDRPSGQILCTLAGHSKKITTLKFVPRDELVVTGSADKTVRIWQGSEEGNYSC IHTLKDHTAEVEAVTIHATQKYFVTAAKDNTWCFYDISTGSCLSQVGEASGQEGYTSASF HPDGLILGTGTTEAVVKIWDVKTQTNVAKFEGHAGPVTAMSFSENGYFLATAALDGVKLW DLRKLRNFRTFSPYDSDTPTNSVEFDFSGSYLAVAGSDIRVYQVANVKTEWNLIKTLPDL SGTGKVTSAKFGADAKYIAVGSMDRNLRIFGLPGDDQMEDDTKPSSE NT seq 1584 nt NT seq  +upstreamnt  +downstreamnt atgatctgcgcaatctccggcgaggtgccggatgagccggtggtatccaagaggtcgggg ctccttttcgagcggcggctcatcgagcgctacattgaggaccatggaaagtgcccggtc accaaggatgacctctccatggacgacatcgtgctggtgaagaccaacaaggttgtgaag cccaggcctttgcaggctgcaagtgttcctggactcctcgggatctttcaaaatgagtgg gatgctctcatgctttctaactttgctttggagcagcagcttcacacagcaagacaagaa cttagtcatgcgctataccagcatgatgctgcctgccgtgttatagccagattaaagaag gaaagagatgagtctagagcacttttggctctagctgagaggcagattccggcatcgatg gcgggagctacacctgcagcggcagtttccaacggaaaaagagcaatggaagaggaaatt ggccctgatgggaagaagattcgtcctggtatcaatcctgtcatgattgatgaactgaca gagtgtaataccatgctttctgcccagcgtaagaaacgacaggtaccaccaagtttggca ccaattgatgcacttgagagatatactcagatctctagtcatccgctccacaagacaaac aagccaggcattttatctatggatatgcatccttcaaaggatattattgcaactgggggc atcgatacgaatgcagtgctctttgataggccatctggtcaaatcctgtgcacacttgct ggtcactccaagaagataactactttgaaatttgttccccgtgatgagcttgtcgtaact ggatcggcagacaagactgttcggatttggcaagggagtgaggagggaaactacagttgc atccatacattgaaagatcatactgctgaggtcgaagctgtcacaatccatgcaactcag aagtactttgtgactgctgccaaggataatacatggtgtttctatgatatttcgacaggg tcttgcctctcacaggttggcgaggcttcaggacaagagggatatacatctgcttctttc caccctgatggtcttatccttggaacagggactactgaagctgttgtcaaaatttgggat gttaagacacagacaaatgttgcaaagtttgaggggcatgctggaccggtcactgctatg tccttctctgaaaatggttacttcctggcgactgccgctcttgatggtgtcaagctttgg gatctacggaaattgagaaattttaggactttctcgccatatgattcggacacaccaaca aattctgtggaatttgattttagcggcagctatcttgctgttgctggttcagatataagg gtttaccaagtagctaacgttaagactgaatggaatcttatcaagaccctgccagatttg tcaggaacagggaaagtgacctctgcaaagtttggagctgatgctaagtatatcgcagta ggttctatggaccgtaacctgcggatatttgggctgcctggagatgatcaaatggaggac gacacaaaaccctcgtctgagtga

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