Lolium rigidum (rigid ryegrass): 124705546
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Entry
124705546 CDS
T09103
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
lrd04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124705546
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124705546
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124705546
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124705546
03036 Chromosome and associated proteins [BR:
lrd03036
]
124705546
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124705546
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124705546
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124705546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
124705546
NCBI-ProteinID:
XP_047093204
LinkDB
All DBs
Position
4:125355782..125363864
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AA seq
541 aa
AA seq
DB search
MEVEAARRDASALDPELLQLPELAPGALRENSTIADALYTQWLVLPETAKLVKSLIEDAK
GGGSLNVAGSSASTNAASSSSLPSMFPAGSAPPLSPRSTAGSPRVMRRGSGAGPSTLGSP
LKVVSEPVREVIPQFYFKNGRPPPKDLKEQCLSRLDHLFFAGEGLQIQEFRPVIKDICKL
PSFLSGVLFKKIDAACSGTVTRDAFIAYWINENKITLDTPSQIFEILRKPGCSYLTQEDF
KPVLKELLATHPGLEFLQGTPEFQERYAETVIYRIFYSINRCGNGHLTLRELKRGNLVAA
MQQLDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
VFAQVPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILSTNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENETYFTLRDLKKCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaggcggcgaggagggatgcgtcggcgcttgacccggagctgctgcagctc
ccggagctcgcgcccggcgcgctccgggagaactcaaccatagccgacgcgctctacacg
cagtggctcgtgcttcccgagaccgccaagctggtgaagtctttgattgaagatgcaaaa
ggcggtggctcactgaatgttgctgggagttctgccagcacaaatgctgcttcaagtagt
tctttgccatcaatgttcccggctggtagtgctcccccactttctcctaggagcactgct
ggctctccccgtgttatgagacgaggatctggagctggaccatcaaccttgggatctcct
ctaaaagtagtcagtgaacctgtgagagaggttattcctcagttttacttcaagaatggg
cgccctccaccaaaagatttgaaggagcaatgtttgtctagactagatcacctatttttt
gccggcgagggactccagatacaagaattcagaccagtcataaaagatatatgcaaatta
ccatccttcctctctggtgttcttttcaagaagatcgatgctgcttgctctggaactgta
acaagggatgcgtttatcgcgtactggattaatgaaaataagataacactggatacacct
agccagatatttgaaatattaagaaagccgggttgcagttatctcactcaggaggacttt
aaacctgtcctaaaagaactcttggcaactcacccaggtttagagtttctacagggcact
cctgagtttcaggagagatacgcggagactgtaatatacagaatattttactccataaat
agatgtggaaatggccatcttaccctccgagaactaaaacgtgggaatttagttgctgca
atgcagcagctggatgaggaagaggacatcaacaaagtactgagatatttctcgtatgag
catttctatgtgatctactgcaaattttgggagctggacacagatcatgatttcctgatt
gacaaagagaatcttatcagatatggaaatcattcgctgacttacagaatagttgataga
gtctttgcacaggtcccaaggaagttcacaagcatgaccgaaggaaagatgggttatgaa
gattttgtttactttattttgtcggaggaagataaatcatctgaacctagccttgagtac
tggtttaagtgcattgatcttgatggcaatggcatattaagtaccaatgagatgcagttt
ttctatgaggagcagttgcatcgcatggagtgcatggcacaggaacctgtgctttttgag
gacatattgtgccaaatgatcgatatgattggaccagagaatgagacctattttacattg
cgggacttaaaaaagtgtaaactatcaggaaatatattcaatatcctattcaatctcaac
aaatttatggcatttgaaactcgtgatccattcctcattcgccaggagcgtgaaaaccca
actttaacagagtgggatcggttcgcccatagggaatatattaggctgtcgatggaagag
gatggtgaagatgcatcaaatggaagtggtgatgtgtgggacgagtcacttgaagctcca
ttttga
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