Lolium rigidum (rigid ryegrass): 124705656
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Entry
124705656 CDS
T09103
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124705656
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124705656
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124705656
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124705656
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124705656
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124705656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
MATH_2
MATH
USP7_ICP0_bdg
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
124705656
NCBI-ProteinID:
XP_047093315
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All DBs
Position
4:complement(131698691..131719873)
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AA seq
714 aa
AA seq
DB search
MTIMTPAPLEQENDEMLVPHQELPAAEPATAQPMEVVAQTEAASTAESQPPEDPQTSRFT
WTIANFTRLNGKKHYSDVFVVGGFKWRVLIFPKGNNVEHLSMYLDVADSANLPYGWSRSA
QFSLAIVNQIDQKFTTRKDTQHQFSARESDWGFTSFMPLSELYDPSRGYLVNDTVVVEAE
VAVRKMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIEKLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVER
LEGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTIVKINDRYEFPLQLD
LDRDDGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLADQWYKFDDERVTK
EDTKKAFEEQYGGEEELPQINPGFNNTPFKFTKFSNAYMLVYIRESDKEKIMCNVDEKDI
AEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLKEQTGKDIYFDLVDHEKVRSF
QIQKQLPFSTFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLTPHEETQSVGQLREI
SNKAQNAELKLFLEVEFGLDLQPLPPEKSKEDILLFFKLYNPEKEVFVLWGGSL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactatcatgactcccgcccctctcgagcaggagaacgacgagatgcttgtgccccac
caggagctacccgccgccgagccggccactgcccagcccatggaagtggtggcgcagacg
gaagcggccagcacggcggagagccagccgccagaggacccgcagacgtcgcgcttcact
tggacaatcgccaatttcaccaggctcaacgggaagaaacactactcggatgtgtttgtt
gtcggtggtttcaaatggcgtgttcttattttccccaaggggaataacgtggagcacctg
tccatgtacttggatgttgccgactcggccaacctcccatatggttggagccgctctgct
caatttagcttggctattgtaaaccagattgatcagaagttcaccacacgaaaagatact
caacaccaatttagtgcacgtgagagcgattggggtttcacatcttttatgccgctgagt
gagctatatgatccaagtagaggttaccttgtgaatgatactgttgttgtagaggcagag
gttgctgtccgcaagatggttgactattggacatatgactccaaaaaggaaacaggttat
gttggtctgaaaaaccaaggagcgacctgttatatgaactctcttctacaaacattgtac
cacataccgtacttcaggaaggctgtgtaccatatgccaaccactgaaaacgacatgcca
tctggaagtattcccttggcgctgcaaagccttttctacaaacttcagtacagtgacaat
agtgtagctactaaagagttgactaaatcttttggatgggacacatatgattccttcatg
cagcatgatgtacaagagctcaatagagttctctgcgagaaactcgaagataagatgaag
ggaactgttgtagaaggaacgatcgagaaattatttgagggtcaccatattaattacatc
gaatgtataaacgtggactacaaatccaacaggaaggagtccttttatgacctccaactt
gatgttaaaggttgtcgtgacgtgtatgcatcgttcgataaatatgttgaagttgagcgt
ctcgagggagataacaagtatcatgcagagaatcatggtttacaggatgcaaaaaaaggc
gttctcttcctcgatttcccacctgttttgcaacttcagctaaagcgttttgagtatgat
tatatgagagacaccattgttaagatcaatgaccgctacgagtttcctctgcaacttgat
ctggatagagatgatggcaagtatcttgccccagatgcagataggagcataagaaacctt
tatactctccacagtgttcttgttcatagtggaggagtacatggtggccactactatgcg
ttcatacgaccaacactagcagatcaatggtataaatttgatgatgagcgtgtaacaaaa
gaagatacaaagaaggcctttgaagagcaatatgggggtgaggaagagttacctcaaata
aaccctggattcaacaacactccattcaaatttacgaagttttcgaatgcctacatgctt
gtatacattcgtgagagcgacaaagagaaaataatgtgtaatgttgacgagaaggacatt
gctgagcatttaaggataaggttgaagaaagaacaagaagagaaagaacataagaagaaa
gaaaaagctgaagcgcatctctataccatcataaagattgctcgagatgaggatttgaag
gagcaaactggtaaggatatatattttgatctggtggaccatgaaaaagtccgcagcttc
caaatacagaagcaattaccatttagtactttcaaggaggaagttgcgaaggaatatggc
atcccagtacagtttcagcgattctggttgtgggctaagaggcaaaaccatacgtaccgg
ccaaatcgcccattaactcctcatgaagaaacacaatccgtggggcaactgcgggagata
tcaaacaaggcacagaatgctgaattgaagctgtttttggaagtggaatttggactggat
ctgcagcctctccctcctgagaagagcaaggaagacattcttctgttcttcaaactctac
aaccctgaaaaagaagtgtttgttttgtggggaggctctttgtaa
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