Lolium rigidum (rigid ryegrass): 124705722
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Entry
124705722 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124705722
04131 Membrane trafficking [BR:
lrd04131
]
124705722
04121 Ubiquitin system [BR:
lrd04121
]
124705722
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124705722
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
124705722
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124705722
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124705722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124705722
NCBI-ProteinID:
XP_047093385
LinkDB
All DBs
Position
4:135808292..135812179
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AA seq
458 aa
AA seq
DB search
MLQIRLSKIGSSDSGAAASGATAGASGGAPAKSSAAAVGGAPESVTVACPDHLIIADLAV
AKSLGAVTNSAVAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARS
DSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFESHVPEAHANLLQTNPEKE
ERNEPDAPNNSRASAGDTQRQSQMPEISTARAPPRPGVSPTSSSHMQDREDRSRYHQSRE
HTPLRPPMLSKPPSFHGRHSYPPGDNQSENNPPQGFDRPYGWAHDSTPGATPLRQESDHG
TQDKQQVMPSSPFMFSPMHPHQQNFMMHMNMNQPLMPNASFNYPVQQDGNPQYFSAPFQM
QLPDGGLDQGSVSGAEGLQRPWGMGLMGNPSQGVGGMAFMQAGFGMMPDSSMNPGMQGQA
DRGGGVQEPMVMQMQMSLPPPPPAQPPSAGQQQTFNRP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagatccgcctgagtaagatcggctcgtcggactccggcgccgccgcctccggc
gcgacggccggggcttctggcggcgccccggccaagtcctcagcggcggcggtgggcggc
gctccggagtcggtgacggtggcgtgccccgaccacctgatcatcgcggacctcgccgtg
gcgaagagcctgggcgccgtcacgaactccgccgtcgccgcgacccgtgcaatcggccgc
cgctcccgccggcccctaggcgagcgcgtccacatctgctcccgctgcgagttccccatc
gccatttacggtcgcctcattccttgtgagcatgctttctgtttagcctgtgcaagaagt
gattccagctgctatctttgtgatgagcgcattcagaaaatccagacggtgaaaatgatg
gaagggatttttatctgcgctgcacctatgtgcctcaagtctttccttaagaaagcagaa
tttgagtctcatgtgcctgaagctcatgccaacctcctccaaactaatccagagaaggaa
gaacgtaatgaaccagatgctccgaacaactcccgtgcttctgcaggagatactcagagg
caatctcaaatgcctgaaatttcgactgcacgtgctcctccaagacctggtgtctcaccc
acttcaagttcacacatgcaagaccgtgaagacagatctcgttaccaccagtccagggag
cacaccccactaaggccccctatgctaagcaaaccgccatcattccatggtcgccactct
tatccaccaggagataatcagtctgaaaacaacccacctcaaggatttgaccggccctat
ggctgggctcatgacagtacacctggggctactccacttcggcaagaatctgaccatggt
actcaagacaagcagcaagtgatgcctagttcacctttcatgttctctccgatgcatcct
catcaacagaacttcatgatgcacatgaatatgaatcagcctttgatgcccaatgcatca
ttcaattatcctgtccaacaagatggaaatccacagtatttcagtgctcctttccaaatg
caacttccagatggtggattggatcaaggttccgtgtcgggggctgaggggcttcagcgg
ccatggggcatgggtttgatgggcaatccatctcagggagttggcggcatggccttcatg
caagctggttttgggatgatgcctgacagctcgatgaatccaggtatgcaaggtcaagct
gaccgtggtggcggtgttcaagaacctatggtgatgcaaatgcagatgtcccttccccca
cctccccctgcacaacccccctcagctgggcagcaacaaactttcaacaggccgtga
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