Lolium rigidum (rigid ryegrass): 124705723
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Entry
124705723 CDS
T09103
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124705723
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124705723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_RIG_1st
zf-XS
Motif
Other DBs
NCBI-GeneID:
124705723
NCBI-ProteinID:
XP_047093386
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All DBs
Position
4:complement(135813239..135819611)
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AA seq
788 aa
AA seq
DB search
MATKRAYKLQEFVAHASGVNCAKFGRRTSRILITGGEDQKVNVWAVGKPSAILSLSGLTS
PVESVSFDSSEVMIGAGAASGTIKIWDIEEAKVVRTFTGHRSNCASLDFHPFGEFFASGS
SDTNMKIWDMRKKRCIHTYQGHTQRIDALRFTPDGRWIVSGGADSSVKIWDLTAGKLLHD
FRLHDGPVNCLDFHPHEFLLATGSADKTIKFWDLETFELIGSSEPENCREYFVQGNVVSS
MTFNSDGKTLFCGLHESLKVLSWEPVICHDAVDVGWSTLADLSVHEGKLLGCSYNQSCIG
IWVVDLTKIEPYAADNAESVDMPIQASTSISSMLGKLSVGSEANGTPSNTLRKRPMSSSK
EIHVASSPAVTRRLSKAPETSDLRLTRTGSAPLLPPRGRFNQDSTDDLKRLTANVCSSVD
LSSSARMSSDDSQTAASPTHRPRSNVFAYSSKGSSFVPVVFPRHSSKVDAGPNLTESTTT
DLRTVDRENLLKGHLVTDHGKEVRQCVFPSKCSTSKRNHVTETSGDGDINYFGPLCTEGV
DSNEVGDWYDVSDLEETKSEAGRNPEFKNVNRTAVFVGTGRLRGSYERSQNAPTLEGLRR
HSSFAGEQSVLVNDEDVIADLMENHQEFIHGMTPRLARLEVVYRCWQNNDIKGSVNAMRR
MVDHAVTADIFSVLMENTTKYITLDICAYTLPLACNLLESSYDRHLNIALGMILKLVRSF
GATASSNMSAAPPVGVDIEAGQRLECFGELKRVNARLISLTRREGKVGRLARELSLFLQD
IFRLPSSV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagcgcgcgtacaagctccaggagtttgttgcgcatgcttcgggtgtcaat
tgtgccaagttcgggaggcggacatcgagaattctgatcactggtggggaagatcagaaa
gtcaatgtctgggcagtagggaaaccaagtgccatcctgagcctatcaggccttacaagt
ccagttgagtcagtgagctttgattcctcggaggttatgataggtgcgggagcagcaagc
ggaacaataaaaatatgggatattgaggaagcaaaagttgttcgaactttcactggtcac
agatcaaattgtgcctctcttgatttccacccttttggagaattttttgcctctggttct
tcagatacaaacatgaaaatatgggatatgcggaagaaaagatgcattcacacataccag
ggccatacccagaggattgatgcgcttagattcactcctgatggtcggtggattgtttct
ggtggggctgatagttctgtcaagatctgggatttgacagctggaaagctcttgcatgac
tttaggcttcatgatggtccagttaactgcttagattttcatcctcacgagttcttattg
gccacaggttcagctgataagactattaaattttgggaccttgagacttttgagttgatt
ggctcttctgaaccagagaattgccgggaatactttgttcagggtaatgtagttagctct
atgacattcaacagtgatggtaaaacacttttttgtggattacatgaaagcttaaaggtt
ctttcatgggaacctgtcatatgtcatgatgcggttgatgttggctggtcgacattagcg
gatttaagtgtacacgagggaaaacttcttggttgctcatacaaccaaagttgtatcgga
atatgggttgtggacttgacgaaaattgagccatatgctgctgataatgctgaaagtgtt
gatatgccgatacaagcctctactagcatatcgtcaatgttggggaagctatctgtaggc
tcagaagccaatgggactccatctaatactttgcgcaagcgtccgatgtcatcttcaaaa
gaaattcatgtagcgtcctctcctgcagtgacaaggagattatcaaaagcacctgaaaca
agtgaccttcggctcacaagaactggatctgcacctcttcttcctcctaggggtaggttc
aaccaagattccactgatgacctgaagagattgacagctaatgtctgctccagtgtggat
ctctcttcaagtgctagaatgtccagtgatgactcacaaacagctgcttctcccacacat
agaccaaggtcaaatgtgtttgcatatagtagtaaaggatcatctttcgtgcctgttgtt
ttcccaaggcatagctctaaagtggatgctggtccgaatcttactgaatccaccactact
gacttgcgaactgttgatcgtgaaaatttactaaaaggtcatctggtgacggatcatggt
aaagaggttcgtcaatgcgtatttccatcaaaatgcagtacttcaaaaagaaatcatgta
acagaaacttcaggtgatggggacattaattattttgggccattgtgtaccgagggtgtg
gactctaacgaagttggtgactggtatgatgtttctgatttggaagaaacaaaatctgaa
gctggaaggaatccagagtttaagaatgtcaacagaacagcagtgtttgtaggaacagga
cgtctacgtgggagttatgagagaagccagaacgcaccaacgttagaaggcttgaggagg
cattcttcatttgctggtgaacagagcgtgttggttaatgacgaagatgttatagctgac
ctaatggaaaaccatcaagaattcattcatggcatgacacctcggctggcaagactagag
gtggtttaccggtgttggcaaaataatgatatcaagggctctgttaatgctatgcgaaga
atggtggaccatgctgttactgctgacatatttagtgtattgatggagaacactactaag
tatatcacactagacatttgcgcttatactttacctcttgcctgcaaccttctcgaaagc
agttatgacagacatctgaacattgccttggggatgatccttaagcttgtcagaagcttt
ggagccacagcatcttcaaacatgtcagctgctccaccagtcggtgtggacatcgaggcc
ggtcagcggttggaatgcttcggagaactgaaaagggtgaatgccagactcatatccctg
acaaggcgagaaggcaaggttgggagattggcacgggagctgagcctctttcttcaggac
atcttcaggctgccaagcagcgtatag
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integrated database retrieval system
