Lolium rigidum (rigid ryegrass): 124706136
Help
Entry
124706136 CDS
T09103
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124706136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124706136
03051 Proteasome [BR:
lrd03051
]
124706136
Membrane trafficking [BR:
lrd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
124706136
Proteasome [BR:
lrd03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124706136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
UBA_7
STI1-HOP_DP
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
124706136
NCBI-ProteinID:
XP_047093751
LinkDB
All DBs
Position
4:complement(158539048..158543727)
Genome browser
AA seq
568 aa
AA seq
DB search
MGGAGEGGGSGDGGGESPPSGALAALNIRCANGTKFTVRADLGATVGAFKDVVAGISDVP
APQQRLIYKGRILKDEQTLESYGVETDHTIHLVRGVAQPAASGAPAAASPQASTTPASGP
AGGLFPGLGATGAASGRPAGLFGAGLPELDQMQQQLSQNPNLMREIMNMPMMQNLMNNPD
LIRNMIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMSNIE
SSPEGFNMLRRMYETVQEPFLNATTMGGGGEGTPASNPFAALLGNQGSNQPSNPATNAPT
TGQESTTGTPVPNTNPLPNPWNTNAGGAQGTTRSGPAANTRTGATGGLGGLGSLDLNSLL
SGLGGNARTGAAGGLGGLGSADLSSLLGGPPDASHLSQMLQNPAMMQMMQNIMSDPQSMN
QLLNMNPNARNLMESNTQLRDMFQNPEFLRQMTSPEALQQLLSFQQTLSSQLGQQQPSRD
GNLGGNGTGTQGNAGLDSLMGMLSGLGAGGGLGVPNTSNVPPEERYATQLGQLQEMGFFD
TAENIRALMATSGNVHAAVERLLGNFGQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagcaggcgagggcggcgggagcggggacggcggcggcgagtccccgccctcg
ggggcgctggcggcgctcaacatccggtgcgcgaacggcaccaagttcacggtgcgcgcg
gacctgggcgccacggtcggcgccttcaaggacgtcgtcgccgggatctccgacgtgccc
gcgccccagcagcgcctgatctacaagggccggatcctcaaggacgagcaaaccctagaa
agctacggagttgagacagatcacaccattcacttggtgcgaggcgttgcccaaccggct
gcttcaggagcacctgctgcagctagcccccaagcttcaactactcctgccagtggtcct
gcaggtggcttatttccaggccttggtgccactggagctgccagtggcagaccagcaggt
ttatttggggctggacttccggaattagatcaaatgcagcagcagttgagccagaatccc
aacctaatgagggagataatgaatatgccaatgatgcagaatctcatgaataaccctgat
ctaatacgcaatatgattatgaataatccacaaatgcgtgatattatcgatcggaatcca
gatcttgcccatgtcctcaatgacccaagtgttctccgccagacccttgaagctgccaga
aaccctgaaatcatgagggagatgatgcggaacacagacagagctatgagcaacatcgaa
tcatcccctgaaggcttcaatatgctccggcgtatgtatgaaactgttcaggagcctttc
cttaatgcaaccacaatgggaggtggtggggaaggcaccccagcctctaacccgtttgca
gctcttcttggaaatcaggggtctaaccaacccagcaatcctgctacaaatgctccaact
actggccaagagtccacaacaggaacccctgttccaaatactaatccacttccaaacccc
tggaacaccaatgctggtggtgcgcaaggaacaacgcggtcaggtcctgctgccaatacc
aggactggtgcaacaggtggcctaggaggcctgggttcactagatttgaacagtctgctc
agtggtcttggtgggaatgcaagaaccggtgctgctggtggtctaggagggctgggatca
gcagatttgagcagtctgctcggtggtccacctgatgcttctcatttgagtcaaatgctg
caaaaccctgctatgatgcagatgatgcagaacattatgtctgacccacagtcaatgaac
cagttgcttaacatgaacccaaacgcacgtaacttgatggaatcaaatactcagttaagg
gatatgttccaaaatccagaatttcttcgccagatgacatccccagaggctctgcagcaa
ttactctcattccagcagacactgtcatcacagcttggccaacaacaacctagccgggat
ggtaacctaggaggcaatggcacaggcacgcagggaaatgctggcctggacagccttatg
ggcatgctcagtgggcttggtgctggaggtggcttaggtgtaccaaatacctccaatgtg
ccaccagaggagcgctatgcaacacaacttggtcagctccaggaaatgggtttctttgac
actgcggagaacatccgagcgctgatggccacttctgggaatgtacatgctgctgtggag
cgccttcttgggaattttggccagtag
DBGET
integrated database retrieval system
