Lolium rigidum (rigid ryegrass): 124706159
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Entry
124706159 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: stromal 70 kDa heat shock-related protein, chloroplastic-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
lrd04141
Protein processing in endoplasmic reticulum
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124706159
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124706159
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124706159
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124706159
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124706159
03009 Ribosome biogenesis [BR:
lrd03009
]
124706159
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124706159
04131 Membrane trafficking [BR:
lrd04131
]
124706159
03051 Proteasome [BR:
lrd03051
]
124706159
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124706159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124706159
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
124706159
Spliceosome [BR:
lrd03041
]
Complex B
Other components
Prp19 complex
124706159
Complex C
Prp19-CDC5 complex
124706159
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124706159
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP70 / DNAK
124706159
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124706159
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
124706159
Proteasome [BR:
lrd03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
124706159
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
124706159
Exosome [BR:
lrd04147
]
Exosomal proteins
Proteins found in most exosomes
124706159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
PilM_2
FGGY_C
ParM_N
Hydantoinase_A
DP
IFT57
Motif
Other DBs
NCBI-GeneID:
124706159
NCBI-ProteinID:
XP_047093766
LinkDB
All DBs
Position
4:160333441..160338570
Genome browser
AA seq
685 aa
AA seq
DB search
MSTTTFPTSTPFFVHHGSRRPSVNVRTAAAVYGRGGRRWRPLRVTCEKVVGIDLGTTNSA
VAAMEGGKPTIVTNAEGARTTPSVVAYTKAGDRLVGQIAKRQAVVNPENTFFSVKRFIGR
KMNEVAEESKQVSYRIVRDDNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKV
TKAVITVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLG
GGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAGSFKNDEGIELLKDKQALQ
RLTEAAEKAKMELSSLTQTNISLPFITATADGPKHIETTITRGKFEELCSDLLDRLRTPV
DNSLRDAKLSLKEIDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQAG
VLSGDVSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINV
LQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAVDKGTGKKQDIT
ITGASTLPKDEVEKMVEEAEKFASEDKEKRDAIDTKNQAESVIYQTEKQLKELGDKVPAD
VKGKVEGKLKELQDAVAGGSTQTIKDALAALNQEVMQLGQSLYQQQGAXGAGPTPGADGA
ADSAASSEKPGDDGDVIDADFTDSK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccacgaccttccccacctcgacccccttcttcgtccaccacggcagccggcgc
ccctccgtcaacgtccggacggcggcggcggtgtacgggcgcgggggccggcggtggcgg
ccactgcgggtcacctgcgagaaggtggtggggatcgacctcgggaccaccaactccgcc
gtcgcggcgatggagggcggcaagcccaccatcgtcaccaacgccgagggggcgcggacc
acgccgtcggtcgtggcctacaccaaggccggggaccgcctggtggggcagatcgccaag
aggcaggcggtggtcaacccagagaacaccttcttctccgtcaagcgtttcatcggccgg
aagatgaacgaggtcgcggaggagtcaaagcaggtgtcctaccgcatcgttagggacgac
aacggcaacgtcaagctcgattgtccagcaatcggcaagcagttcgctgccgaggagatc
tctgcgcaggttttgagaaagctcgttgatgatgcgtcaaagtttttaaatgacaaagtc
accaaggctgtgatcactgtccctgcttacttcaacgactcgcagaggacagctacaaaa
gatgctggccgcattgctgggttggatgttctccgtatcataaatgagcctactgcagcg
tcgttagcatatggttttgaaaaaaagaacaatgagacaattctggtttttgacctcgga
ggaggcacctttgatgtttcagttcttgaggttggtgatggtgtttttgaggtgctgtct
acttctggtgacacccatcttgggggcgatgactttgacaagagaattgttgattggttg
gctgggagcttcaaaaatgatgagggtattgagctgctgaaagacaagcaagctcttcag
cgacttacagaagcagctgagaaggcaaaaatggagttatcatcattgacccaaacaaat
attagcttacctttcataacagctactgctgatgggcccaagcacattgagacaacaatt
accaggggcaaatttgaggagctatgctcagatcttcttgacaggctgaggacacctgtc
gacaactctcttagagatgcgaagctgtcacttaaagaaatagatgaggtgattcttgtg
ggtggttccaccagaattccagctgttcaggagcttgtgaagaaaatgactggaaaggac
ccgaatgtgacagtcaaccctgatgaggttgttgcccttggagcagctgtgcaggcagga
gtattgtcgggcgatgtgagcgatattgtgcttctcgatgtcacgccactgtctataggt
ttggagacactgggtggggtgatgaccaagattatcccaaggaacacaacgctgcccacc
tcgaagtcagaggtcttctcgactgctgctgatggacagacaagtgtggagattaatgtt
ctccaaggagaaagagagtttgtcagggacaacaaatctcttggtagcttccggcttgat
ggaattcctcctgctccacgtggtgttccacaaattgaagtcaagtttgatattgatgcc
aacggtatcctgtctgttgctgctgtggacaaaggcactggaaagaagcaggacatcact
atcaccggagccagcacattgccgaaggatgaggtagagaagatggttgaagaagctgag
aagttcgcctcggaggacaaagagaagagagacgcaatcgacaccaagaaccaggcagag
tctgtcatctaccagactgagaaacaactgaaggagctcggcgacaaggtcccagctgat
gtcaaggggaaggtcgaggggaaacttaaggaactccaggacgcagttgctggtggatca
acccagaccataaaggatgcactggctgcactgaaccaagaagtgatgcagcttggccag
tccctttaccagcagcagggcgccnccggagcaggccctactcctggagctgatggcgct
gctgattctgcagcttcatctgagaagccaggagatgatggtgacgttatagatgctgat
tttaccgacagcaaatga
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