Lolium rigidum (rigid ryegrass): 124706455
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Entry
124706455 CDS
T09103
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124706455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124706455
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124706455
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124706455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
124706455
NCBI-ProteinID:
XP_047094076
LinkDB
All DBs
Position
4:178866233..178872490
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AA seq
724 aa
AA seq
DB search
MIAKSNAGYLGVSEPISLSGPAEKDLIQTAEVEKFLADASLYESQDQAVSREEVLGKLDQ
TVKAWIKKATRVSGYGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYF
FRCLHDMLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSI
LHNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVIGFLGGINW
AILVARICQLYPNASPSMLISRFFRVFSQWKWPNPVILCHIEEGPLGLPVWDPRRNFRDR
GHQMPIITPAYPCMNSSYNVSSSTKYVMIQEFTRGFEICQAIDENRATWDDLFEPYPFFE
LYRNYLEIGITARNEDDLRNWKGWVESRLRQLVLKFERYTHEMLLAHPHPRDFSDGSRPL
HSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKISVLAYVHRREGMDIEVSHVKRKDIPLF
VFPGGIRPPRSSRTAGRNSGAVSRNDVTPDRHVGNPLETESWSDPQSAQDGSGGYQSTSL
LPSNLSSRETQNILNGHLNLHTETVEHEHPGRFLGSPPAPGDNAVVDVVTQPNNMPSTSS
NGGPTNGLGICFNSTQKESEGIRVNNLVSSPPAPVDELVSYQAKPDNKHGPPHGSSLEGC
SERILGQACNLSSNGNNHLKRKAEDELEPLELACPSVRATPASTVQRKPLRLRLSTLPQP
KQAE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgaagagcaatgctggttatcttggcgtctccgagcctatctcgctaagcggg
ccggccgagaaggatctcattcagacggctgaggtcgaaaagttccttgctgacgcgagc
ctgtatgagagtcaagaccaggccgtctcgcgagaagaggtcttaggcaaactagaccag
actgtgaaagcttggattaagaaggctactagggtgagcggttacggcgagcagtttgtg
caagaagcaaatgccaagatcttcacattcggttcataccgccttggggtgcacggccct
ggcgctgatattgatacactatgcgttggtccaagacatgcaactcgaaatgactacttc
ttccggtgtcttcacgatatgctagctgagatgccagaagtttctgagttacatccggta
ccagatgctcatgtgcctgttctggggttcaaactttgtggggtgtccattgatctttta
tatgcaaaccttgcacatgtggtgattcctgatgatcttgatctttctcaggactccata
ctgcacaatgttgacgaacaggctgtccgtagtttaaatgggtgtcgagttactgatcag
atcctacgattggtcccgaacattccgagtttccgcacaaccttaaggttcatgaggtac
tggggaaagcgtcgtggggtgtactcaaatgttataggatttttgggtggcataaattgg
gcaattcttgttgctcgaatatgtcaattgtacccaaatgcatcgcccagcatgttgata
tctcggtttttcagagtcttcagccagtggaagtggcccaaccctgttatactttgccat
attgaggagggtcctcttggcctccctgtttgggatccaagaagaaactttagagatagg
ggccatcagatgcctataattacacccgcatatccttgtatgaattctagctataacgta
tctagtagtactaagtatgtgatgatccaagaattcacgcgaggatttgagatctgccag
gcaatagatgaaaatagagcaacctgggatgatctattcgagccatatccttttttcgaa
ttatatagaaattatttagagattggtatcacagcgagaaatgaagatgacctcaggaat
tggaaaggctgggtagagtctcgtcttcgccaacttgtactgaagtttgagcgatataca
catgagatgctccttgcgcatcctcatcccagagatttctcagatggatccaggccgttg
catagcttttattttatgggtctttggagaaaacaaactgcccaacctcaagaagctgag
caatttgacatcagaggaatcgtaaatgagtttaagatttcagttcttgcttatgtacat
cggagagaaggaatggatattgaagtctcccatgtaaaaagaaaagatatccccttgttt
gtttttcctggtgggatacgtcctccacggtcttccagaacagcaggcaggaacagcggt
gctgtttctaggaatgatgttacacctgatcgtcatgttggaaatccattggagactgag
agttggagtgatcctcagtctgctcaagatggttctggtggctatcaaagtacttcgttg
ttgccctctaatttatcaagtagagaaacccaaaatattttgaacgggcatttgaatctc
cacacagaaactgttgagcatgaacatccagggcgttttcttggaagtccacctgctcct
ggggataatgctgtggtggatgtggttacacaacctaacaacatgccatctacttcaagc
aatggtggtccaacaaatgggttgggcatttgtttcaacagtacacaaaaggaatctgag
gggattcgtgtaaataatcttgtgagttcccctcctgctccagttgatgagctggtatcg
tatcaagctaagcctgacaataaacatggacctcctcatggatcatctttggaaggatgc
tctgaaaggatcctggggcaagcatgcaacctgagctccaatggtaataatcatttgaag
cgcaaggctgaggacgagctggagccacttgagcttgcttgcccgtcagttcgcgctact
cctgcatcgactgtccaaagaaagcccctcaggcttcgattgtcaactttgccacaacca
aaacaagctgaatga
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