KEGG   Lolium rigidum (rigid ryegrass): 124706582
Entry
124706582         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
lrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124706582
  09124 Replication and repair
   03420 Nucleotide excision repair
    124706582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124706582
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124706582
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124706582
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124706582
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124706582
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124706582
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 124706582
NCBI-ProteinID: XP_047094198
LinkDB
Position
4:complement(185047838..185050480)
AA seq 177 aa
MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEEVGKGLIR
EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDYLGIISDPGAAS
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccacatcgtcctggagcggaacatgcagctgcacccgcgccacttcggcccg
cacctgcgcgacaagctggtcgccaagctcatgaaggacgtcgagggcacctgcagcggg
cggcacgggttcgtggtggcgatcacgggggtggaggaggtcgggaaggggctcatccgg
gagggcacgggcttcgtcaccttccccgtcaagtaccagtgcgtcgtcttccgccccttc
aagggcgagatcctcgaggccgtcgtcaccatggtcaacaagatggggttcttcgcggag
gctgggcctgtgcagatcttcgtgtcaaatcatttgattcctgacgatatggagttccaa
tctggtgatgtgccaaactacacaacttctgatggatcggtgaaaattcaaaaagaaagt
gaggttcgtttgaagatcataggcacccgtgttgatgcgacagaaattttttgcatcggc
acgataaaagatgactatctgggtattatcagtgatcctggtgcagcatcgtaa

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