Lolium rigidum (rigid ryegrass): 124706706
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Entry
124706706 CDS
T09103
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A/B-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124706706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124706706
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124706706
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124706706
NCBI-ProteinID:
XP_047094330
LinkDB
All DBs
Position
4:190629606..190636695
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AA seq
376 aa
AA seq
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MASKLVVLGIPWDVDTEGLKEYMTKFGPLDDCIVMKDRSSGRSRGFGYVTFSSVEDAKNV
VNSEHILGDRTLEVKIATPKEEMRPPGNKKATRIFVARIPQSVDEAMFRRHFQTFGEITD
LYMPKELGSKDHRGIGFVTFRSAECVDNLMQETHEFDGTTVVVDRATPKQDEDVRHPPRR
AAHGDGRRAAHGDGGYGSYNAYITAATRYATLGVPTLYDHPGPAYGRGYLHEPVATSKKI
FIGRLPQEANTDDLWDYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFAEDGVADRVARRSH
EILGQEVAVDSAEPVEGGGSRGGGYMEPPGPYGAYGPMLSYGQFSGSLGYDYGYGPSGGS
GSSSSRSRVHPRYRPY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcttgtggttcttggaatcccctgggatgtcgataccgaaggattaaaa
gagtacatgaccaagtttggccccctggatgactgcatcgttatgaaggatcgctcatct
ggtcgatctcgtggttttggatacgtgacattttcgtctgtagaggatgcaaagaatgtc
gtgaactccgagcatattcttggagaccgaactctggaagtgaagatagcaactcccaag
gaagaaatgcgacctccaggaaacaagaaagctaccaggatatttgttgctcgaattcca
cagtctgtggatgaggcaatgtttcgcaggcattttcaaacttttggagaaataacagat
ctttatatgcccaaggaattgggttcaaaagaccatcgtggaattgggtttgtcactttc
cggagtgctgaatgtgtggacaatcttatgcaagaaacccatgagtttgatggtacgact
gttgttgttgaccgtgcaactcccaagcaggatgaagatgtgagacaccctccaaggaga
gccgcgcatggtgatggaaggagagccgcgcatggtgatggtggttatggttcatacaat
gcatacattacagctgctaccagatacgcaactctgggtgtaccaacactgtatgatcat
cctggacctgcttatggaagagggtacttacatgagcccgttgcaacaagcaaaaagata
tttattggtagacttccccaagaagcaaatactgatgatttatgggactactttggtcga
tttggcagaatcgtggatgcttacatcccaaaggatcctaaaagaagtggccaccgtggt
tttggttttgttacttttgctgaagatggtgtagcagatcgtgtagcacgaagaagtcat
gaaattctggggcaggaggttgctgtagactcagccgaaccagttgagggtggcggctcg
agaggaggcggttacatggaaccgccagggccatatggagcttatggcccaatgctgtct
tatggccagttctccggcagtcttggttatgattatggttatggtcccagtggaggcagc
ggcagcagcagcagcaggtcaagagtacatccacggtacagaccgtactga
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