Lolium rigidum (rigid ryegrass): 124706723
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Entry
124706723 CDS
T09103
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124706723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124706723
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124706723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124706723
NCBI-ProteinID:
XP_047094347
LinkDB
All DBs
Position
4:complement(192101473..192107227)
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AA seq
264 aa
AA seq
DB search
MSRRNGCTIYVGNLPEDIREREIEDLFYKYGPIVDIDLKIPPRPPVFAFVEFEDPRDADD
AIYGRDGYDFDGQRLRVELAHGGRGASFDRSSSYGSSGRRGAARRSDYRVMVTGLPSSAS
WQDLKDHMRRAGDVCFSDVYREAGAITGIVEYTNYEDMKHAIRKLDDSEFRNAFSRSYIR
VREYNTKRSRSYSRSRSPSCSYSRSRSRSYSRSPRAASRSPSPVKARSSSRSLSPAAPPH
DKSASRSPTRSRSLSPSKSPVKSD
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacggaacggctgcaccatctacgtgggcaatctccccgaagacatccgggag
agggaaatcgaggatctcttctacaagtatggccctatcgtggacatcgacttgaaaatt
cctccaaggcctcctgtttttgcttttgttgagtttgaagacccacgtgatgctgacgat
gcgatttatggccgtgatggatatgatttcgatggccagaggttgcgggtggagttagct
cacggtggaagaggcgcttcttttgatcgatcaagcagctatggcagttctggacgccgt
ggtgcagctagacgttctgattaccgtgttatggttactggattaccttcttccgcatca
tggcaagatctcaaggatcatatgcggcgagctggtgatgtctgtttctctgatgtttat
cgtgaggctggagcaattactggaatagttgaatataccaattatgaagatatgaaacat
gcgataaggaagcttgatgattcagagttccgtaatgcgttttcacgatcgtatatcagg
gtgagggagtacaatactaagcgtagccgctcttactccagaagcagaagccccagctgc
tcgtactcgagaagcagaagtcgcagttatagcaggagtccaagagctgcttctcggtct
ccgtcacctgttaaagcaaggtcatcatcaagatccctatcacctgccgctccccctcac
gacaagtctgcgagcaggagccccaccaggagcagaagtttgtccccatctaagtctcct
gtgaaatctgactga
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