Lolium rigidum (rigid ryegrass): 124706923
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Entry
124706923 CDS
T09103
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124706923
Transcription machinery [BR:
lrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
124706923
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
124706923
NCBI-ProteinID:
XP_047094551
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Position
4:complement(206605627..206608583)
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AA seq
576 aa
AA seq
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MGLRMVRGPCCCSPSPSSSSSVWPWMLQAQLPRHPHPPCESSQVSGRPACSESLRVLALH
LLLNRHANLNRRPGDTVRTAASSSGLLQITENKTSSLPKMKVDAERTALDDALDRNTQFG
RIYEDMSSWMDVAYTSSNSLEYNLLMQNIHVLESSLAGQDLVTLERDILVHMEQLGALKW
FNATRSRATVTQTSYEPDFALAWNVTESGPVTSPLEEQSDDQLVIRSGKSQERKLKRIRA
SEKGSGVCVRALPRKSKKSRKSSCSQFIAEWKNYPGRRRSIVREQSELLVTIKECANLEK
IRENMLKEGQVVTYDRWAKAAGVDEAVLKSRLQAGYCCRERLLVTTEWLVKYIARSYTGI
GTAFEDLLQAGKMGVLDGAERFDSQKGCKFSTYVKYWIRKAMLALLAENSGVIQLPARME
SIIRKVKEAKRAIRSNTGRNPIDDEIATFVGVSLANVRLAKKYSRRVVSLYTEVGTGQNA
KFWEVTPDTSLEDPEEVIFRRQLRERLLLVLGTLPVREGHVLKLRHGLEDGRCMSLEQIG
GIYHVSKEWIRKIEKSAMSKLRNEDVHHELKDFCGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcgcatggtgcgcgggccttgctgctgctcgccgtccccgtcctcctcctcc
tccgtctggccatggatgctgcaggcccagctccccaggcacccccaccccccatgtgag
tcgtctcaagtgagtggaaggccagcttgctctgaatccctgagagttctggccttgcat
ctgttgctcaatcggcatgcgaatcttaaccggcgcccgggtgacaccgtcagaactgct
gcgtcttcatctggtttgcttcagataacagagaacaagacaagcagcttgccaaaaatg
aaggtggatgcagaaagaacagcccttgatgatgctcttgaccgaaacacgcagtttggc
aggatttatgaggacatgtcttcctggatggatgtggcttacacaagcagcaacagtttg
gagtacaacctgttgatgcaaaacatccatgtcttggagagtagtttggctggccaagat
ttggtaactctggaaagagacatccttgtacatatggaacaacttggagctctgaaatgg
ttcaacgcgaccaggtccagggctactgttacacaaacctcatatgaaccagattttgca
cttgcttggaatgttaccgaatccggtcccgtgactagtcctctcgaggagcaaagcgat
gatcagctggtcattcggagcgggaaaagccaggagaggaaattgaagagaattagagcg
tctgagaaaggttccggggtttgcgtaagggcgttgccacgaaaatccaaaaaatcacgc
aagtccagttgtagtcaatttatagccgagtggaaaaactatccgggtcgacgaaggagc
atcgtccgagaacaatcggagttgctggtgaccatcaaggaatgtgcaaaccttgagaag
atcagagaaaacatgctgaaggaaggacaagtggtcacctacgataggtgggctaaggca
gctggagttgatgaagcagttctgaagagtagactgcaagcaggttactgctgcagagag
aggctattggtaaccaccgagtggcttgtcaagtacattgcaagatcatacaccggaatt
ggaacagcttttgaagatcttctccaggctgggaaaatgggtgtgcttgatggcgccgag
aggtttgacagccagaaagggtgcaagttctcaacttatgtgaagtactggataaggaaa
gcgatgctagcgctccttgctgaaaattctggagtaatccagctgcctgcaaggatggag
agtatcatccgaaaagtgaaggaagctaagcgggcgatacggtccaacacagggaggaac
ccaatcgacgacgagattgcaacctttgttggcgtgtcacttgccaatgttagattggca
aagaagtactctcgtcgtgttgtttcactctacacggaggtcggaaccggacagaatgcc
aagttttgggaggtgactccagacacatcattggaagatccagaagaagtcatcttccgg
aggcagctgcgggagaggctgcttcttgttctgggcacgctcccagtgagagaggggcac
gtgctgaagctgcgacatggcctcgaggatggcaggtgcatgtctctagagcagatcgga
ggcatctaccatgtgtctaaggagtggatcaggaaaatcgagaagtctgccatgtccaag
ctcaggaacgaggatgtgcatcatgagctcaaggacttctgtggattctag
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