Lolium rigidum (rigid ryegrass): 124706939
Help
Entry
124706939 CDS
T09103
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00511
Other glycan degradation
lrd00513
Various types of N-glycan biosynthesis
lrd00520
Amino sugar and nucleotide sugar metabolism
lrd00531
Glycosaminoglycan degradation
lrd00600
Sphingolipid metabolism
lrd00603
Glycosphingolipid biosynthesis - globo and isoglobo series
lrd00604
Glycosphingolipid biosynthesis - ganglio series
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
124706939
09103 Lipid metabolism
00600 Sphingolipid metabolism
124706939
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
124706939
00531 Glycosaminoglycan degradation
124706939
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
124706939
00604 Glycosphingolipid biosynthesis - ganglio series
124706939
00511 Other glycan degradation
124706939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124706939
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
124706939
Chaperones and folding catalysts [BR:
lrd03110
]
Intramolecular chaperones
Others
124706939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
124706939
NCBI-ProteinID:
XP_047094562
LinkDB
All DBs
Position
4:31873503..31879589
Genome browser
AA seq
542 aa
AA seq
DB search
MPPTLLTYLLLAVVAGSGAASARRHRSPANLTASGNHVYIWPLPKNFTSGTQTLAVDPDL
ALDAQGPGGGAAAVAEAFGRYRSLIFSPWAHAARPVSGAYDVSTLTVVVASADETLELGV
DESYRIYIAAAGGVNSIVGGATIEANTIYGAIRGLETFSQLCVFNYDTKNVEVRYAPWYI
QDEPRFAFRGLLLDTSRHYYPVDVIKEVIDSMSFAKLNVLHWHIIDEQSFPLEIPSYPNL
WKGSYSRSERYTVEDAQYVVSYAKKRGIHVMAEIDVPGHGESWGNGYPKLWPSPSCTEPL
DVSSNFTFEVISGILSDMRKIFPFGLFHLGGDEVYTGCWNVTPHVKQWLDERNMTTKDAY
KYFVLKAQEIAIHLNWIPVNWEETFNSFGENLNPLTVVHNWLGPGVCPKVVAKGLRCIVS
NQGAWYLDHLDVPWEEVYAEEPLAGISDAAQQKLVLGGEVCMWGETADTSDALQTIWPRA
AAAAERMWSPLEAISAQDLETTVLSRLHYFRCLLNHRGIAAAPVTNFYARRPPIGPGSCF
IQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaacacttctcacctatcttctcctggccgtcgtcgccggctccggcgccgcg
tcggcccggcgccaccggtctccggcgaacctcaccgcctccgggaaccacgtctacatc
tggccgctgcccaagaacttcacctccgggacgcagaccctggccgttgaccccgacctc
gcgctcgacgctcagggccccggcggcggcgccgcggccgtcgcggaggcgttcgggagg
tacaggtccctcatcttctccccgtgggcccacgcggcccgccccgtgtcgggggcatac
gacgtgtccacgctcaccgtcgtcgtcgcctccgccgatgagacgctggagctgggagtg
gacgagagctacaggatctacatcgcggctgcgggtggcgtcaattccatcgtcggtgga
gcaaccatagaggctaatacaatatatggagctattcgcggattagagacattcagtcag
ctatgtgtttttaactacgatacaaaaaatgtcgaagtgcgctatgcaccatggtacatt
caagatgaaccacgctttgcttttcgtggcttgctactagatacctcaaggcattactac
cctgttgatgtgattaaggaagtgattgactccatgtcatttgctaagctgaacgttctt
cattggcatatcatcgatgaacaatcttttccgttggagataccatcatatccaaatcta
tggaagggttcatattcaagatcagagcgttacactgtggaagatgcacaatatgttgtc
agctatgctaagaaaagaggtatccatgtcatggcagaaattgacgtacctggtcatgga
gaatcctggggaaatggatatccgaagctgtggccttctcctagctgtacagagccatta
gatgtttctagtaatttcacgtttgaagtaatatctggaatattgtctgatatgagaaag
atcttcccatttgggctgtttcacttgggtggcgatgaagtatatacaggttgttggaat
gtaacaccccatgtgaagcagtggcttgatgaacgcaacatgactacaaaggatgcttac
aaatactttgtgctgaaggcccaggagatagcaattcatcttaactggattcctgtaaac
tgggaggaaaccttcaactcatttggggagaacctcaaccctctgactgttgtgcataac
tggttgggtcctggggtctgccctaaagttgttgcaaagggtttgagatgtatagtaagt
aaccaaggtgcatggtaccttgatcatctcgatgttccgtgggaagaagtctacgccgaa
gagccactcgcaggaataagcgacgccgcacagcaaaagctggtactgggtggagaggtt
tgcatgtggggtgagacagcagacacatctgatgctcttcaaacaatatggcctcgagca
gctgcagctgcagagcgtatgtggagtccattggaggccatatctgcccaagacctggaa
acgaccgtcctgtctcggctacactacttcagatgcctgctgaatcaccgtggaatcgcg
gcagctccagtcacaaacttctatgctcggcgacctccaatcggccctggctcatgtttt
atccagtga
DBGET
integrated database retrieval system